Analysis of interatomic Contacts of Structural Units in PDB entry:
7L1F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7L1F entry

There are 5 chains in PDB entry 7L1F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 32THR 929
C
 ASP 78ALA 191
D
 LYS 2GLY 64
P
 C 1 U 13
T
 A 0 G 17
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 7L1F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
123 130Right-handed alpha
Helix 2
AA2
A
139 149Right-handed alpha
Helix 3
AA3
A
170 176Right-handed alpha
Helix 4
AA4
A
178 200Right-handed alpha
Helix 5
AA5
A
206 210Right-handed 310
Helix 6
AA6
A
234 249Right-handed alpha
Helix 7
AA7
A
276 287Right-handed alpha
Helix 8
AA8
A
305 318Right-handed alpha
Helix 9
AA9
A
367 377Right-handed alpha
Helix 10
AB1
A
378 383Right-handed alpha
Helix 11
AB2
A
416 424Right-handed alpha
Helix 12
AB3
A
447 454Right-handed alpha
Helix 13
AB4
A
455 459Right-handed 310
Helix 14
AB5
A
466 476Right-handed alpha
Helix 15
AB6
A
477 480Right-handed 310
Helix 16
AB7
A
489 493Right-handed 310
Helix 17
AB8
A
505 509Right-handed 310
Helix 18
AB9
A
513 518Right-handed alpha
Helix 19
AC1
A
520 531Right-handed alpha
Helix 20
AC2
A
561 580Right-handed alpha
Helix 21
AC3
A
596 606Right-handed alpha
Helix 22
AC4
A
627 638Right-handed alpha
Helix 23
AC5
A
647 663Right-handed alpha
Helix 24
AC6
A
686 709Right-handed alpha
Helix 25
AC7
A
717 733Right-handed alpha
Helix 26
AC8
A
738 752Right-handed alpha
Helix 27
AC9
A
778 789Right-handed alpha
Helix 28
AD1
A
833 842Right-handed alpha
Helix 29
AD2
A
847 850Right-handed 310
Helix 30
AD3
A
851 866Right-handed alpha
Helix 31
AD4
A
874 895Right-handed alpha
Helix 32
AD5
A
917 925Right-handed alpha
Helix 33
AD6
C
79 94Right-handed alpha
Helix 34
AD7
C
100 108Right-handed alpha
Helix 35
AD8
C
116 118Right-handed 310
Helix 36
AD9
C
119 125Right-handed alpha
Helix 37
AE1
C
134 142Right-handed alpha
Helix 38
AE2
C
173 177Right-handed 310
Helix 39
AE3
D
3 19Right-handed alpha
Helix 40
AE4
D
25 40Right-handed alpha
Helix 41
AE5
D
45 62Right-handed alpha
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There are 9 sheets in PDB entry 7L1F. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 38first strand
Strand 2
A
43 47anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
223 224first strand
Strand 2
A
201 204anti-parallel
Strand 3
A
232 233parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
327 328first strand
Strand 2
A
345 347anti-parallel
Strand 3
A
353 355anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
332 335first strand
Strand 2
A
338 341anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
673 674first strand
Strand 2
A
397 400anti-parallel
Strand 3
A
386 389anti-parallel
Strand 4
C
127 132parallel
Strand 5
C
184 190anti-parallel
Strand 6
C
153 160anti-parallel
Strand 7
C
146 148anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
414 415first strand
Strand 2
A
843 844anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
612 614first strand
Strand 2
A
761 767anti-parallel
Strand 3
A
753 758anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
816 817first strand
Strand 2
A
830 831anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
820 822first strand
Strand 2
A
825 827anti-parallel
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