Analysis of interatomic Contacts of Structural Units in PDB entry:
7L1Q

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7L1Q entry

There are 7 chains in PDB entry 7L1Q (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 26	VAL 499
B	ASP 27	SER 501
C	SER 26	SER 501
D	THR 2	VAL 471
E	MET 1	GLY 470
F	MET 1	VAL 471
G	SER 6	LEU 287

There are114 helices in PDB entry 7L1Q. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	150	157	Right-handed alpha
Helix 2	AA2	A	174	184	Right-handed alpha
Helix 3	AA3	A	201	215	Right-handed alpha
Helix 4	AA4	A	231	253	Right-handed alpha
Helix 5	AA5	A	263	277	Right-handed alpha
Helix 6	AA6	A	282	286	Right-handed 310
Helix 7	AA7	A	287	288	Right-handed 310
Helix 8	AA8	A	289	299	Right-handed alpha
Helix 9	AA9	A	321	325	Right-handed 310
Helix 10	AB1	A	328	338	Right-handed alpha
Helix 11	AB2	A	345	352	Right-handed alpha
Helix 12	AB3	A	372	394	Right-handed alpha
Helix 13	AB4	A	395	399	Right-handed 310
Helix 14	AB5	A	403	421	Right-handed alpha
Helix 15	AB6	A	429	442	Right-handed alpha
Helix 16	AB7	A	443	447	Right-handed 310
Helix 17	AB8	A	452	468	Right-handed alpha
Helix 18	AB9	A	468	479	Right-handed alpha
Helix 19	AC1	A	483	498	Right-handed alpha
Helix 20	AC2	B	100	104	Right-handed 310
Helix 21	AC3	B	150	157	Right-handed alpha
Helix 22	AC4	B	174	186	Right-handed alpha
Helix 23	AC5	B	201	215	Right-handed alpha
Helix 24	AC6	B	216	220	Right-handed 310
Helix 25	AC7	B	232	237	Right-handed alpha
Helix 26	AC8	B	237	253	Right-handed alpha
Helix 27	AC9	B	263	277	Right-handed alpha
Helix 28	AD1	B	282	286	Right-handed 310
Helix 29	AD2	B	287	288	Right-handed 310
Helix 30	AD3	B	289	299	Right-handed alpha
Helix 31	AD4	B	328	338	Right-handed alpha
Helix 32	AD5	B	345	350	Right-handed alpha
Helix 33	AD6	B	358	362	Right-handed 310
Helix 34	AD7	B	372	380	Right-handed alpha
Helix 35	AD8	B	381	399	Right-handed alpha
Helix 36	AD9	B	402	421	Right-handed alpha
Helix 37	AE1	B	429	442	Right-handed alpha
Helix 38	AE2	B	449	468	Right-handed alpha
Helix 39	AE3	B	468	479	Right-handed alpha
Helix 40	AE4	B	483	498	Right-handed alpha
Helix 41	AE5	C	34	38	Right-handed 310
Helix 42	AE6	C	150	157	Right-handed alpha
Helix 43	AE7	C	174	186	Right-handed alpha
Helix 44	AE8	C	201	215	Right-handed alpha
Helix 45	AE9	C	217	221	Right-handed 310
Helix 46	AF1	C	231	237	Right-handed alpha
Helix 47	AF2	C	237	253	Right-handed alpha
Helix 48	AF3	C	262	277	Right-handed alpha
Helix 49	AF4	C	289	299	Right-handed alpha
Helix 50	AF5	C	328	338	Right-handed alpha
Helix 51	AF6	C	345	350	Right-handed alpha
Helix 52	AF7	C	372	397	Right-handed alpha
Helix 53	AF8	C	403	420	Right-handed alpha
Helix 54	AF9	C	429	442	Right-handed alpha
Helix 55	AG1	C	452	467	Right-handed alpha
Helix 56	AG2	C	468	479	Right-handed alpha
Helix 57	AG3	C	483	498	Right-handed alpha
Helix 58	AG4	D	139	146	Right-handed alpha
Helix 59	AG5	D	163	179	Right-handed alpha
Helix 60	AG6	D	191	205	Right-handed alpha
Helix 61	AG7	D	207	211	Right-handed 310
Helix 62	AG8	D	221	244	Right-handed alpha
Helix 63	AG9	D	254	269	Right-handed alpha
Helix 64	AH1	D	280	291	Right-handed alpha
Helix 65	AH2	D	315	323	Right-handed alpha
Helix 66	AH3	D	332	338	Right-handed alpha
Helix 67	AH4	D	360	379	Right-handed alpha
Helix 68	AH5	D	380	387	Right-handed alpha
Helix 69	AH6	D	388	392	Right-handed 310
Helix 70	AH7	D	393	410	Right-handed alpha
Helix 71	AH8	D	416	421	Right-handed alpha
Helix 72	AH9	D	429	443	Right-handed alpha
Helix 73	AI1	D	444	448	Right-handed 310
Helix 74	AI2	D	449	454	Right-handed 310
Helix 75	AI3	D	458	470	Right-handed alpha
Helix 76	AI4	E	139	146	Right-handed alpha
Helix 77	AI5	E	164	178	Right-handed alpha
Helix 78	AI6	E	191	206	Right-handed alpha
Helix 79	AI7	E	221	242	Right-handed alpha
Helix 80	AI8	E	254	269	Right-handed alpha
Helix 81	AI9	E	280	290	Right-handed alpha
Helix 82	AJ1	E	315	325	Right-handed alpha
Helix 83	AJ2	E	332	337	Right-handed alpha
Helix 84	AJ3	E	355	360	Right-handed alpha
Helix 85	AJ4	E	360	387	Right-handed alpha
Helix 86	AJ5	E	388	392	Right-handed 310
Helix 87	AJ6	E	393	410	Right-handed alpha
Helix 88	AJ7	E	415	421	Right-handed alpha
Helix 89	AJ8	E	429	443	Right-handed alpha
Helix 90	AJ9	E	444	448	Right-handed 310
Helix 91	AK1	E	449	454	Right-handed 310
Helix 92	AK2	E	458	470	Right-handed alpha
Helix 93	AK3	F	88	92	Right-handed 310
Helix 94	AK4	F	139	145	Right-handed alpha
Helix 95	AK5	F	163	176	Right-handed alpha
Helix 96	AK6	F	191	205	Right-handed alpha
Helix 97	AK7	F	206	210	Right-handed 310
Helix 98	AK8	F	221	243	Right-handed alpha
Helix 99	AK9	F	254	269	Right-handed alpha
Helix 100	AL1	F	280	292	Right-handed alpha
Helix 101	AL2	F	315	322	Right-handed alpha
Helix 102	AL3	F	332	338	Right-handed alpha
Helix 103	AL4	F	355	360	Right-handed alpha
Helix 104	AL5	F	360	388	Right-handed alpha
Helix 105	AL6	F	389	393	Right-handed 310
Helix 106	AL7	F	394	410	Right-handed alpha
Helix 107	AL8	F	416	420	Right-handed 310
Helix 108	AL9	F	429	443	Right-handed alpha
Helix 109	AM1	F	458	469	Right-handed alpha
Helix 110	AM2	G	7	62	Right-handed alpha
Helix 111	AM3	G	93	111	Right-handed alpha
Helix 112	AM4	G	122	133	Right-handed alpha
Helix 113	AM5	G	148	165	Right-handed alpha
Helix 114	AM6	G	211	287	Right-handed alpha

There are 22 sheets in PDB entry 7L1Q. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	29	34	first strand
Strand 2	A	39	43	anti-parallel
Strand 3	A	71	76	anti-parallel
Strand 4	A	60	66	anti-parallel
Strand 5	A	51	55	anti-parallel
Strand 6	A	87	94	anti-parallel
Strand 7	A	29	34	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	96	99	first strand
Strand 2	A	125	128	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	107	108	first strand
Strand 2	A	221	227	parallel
Strand 3	A	192	199	parallel
Strand 4	A	256	260	parallel
Strand 5	A	314	316	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	318	319	first strand
Strand 2	A	167	169	parallel
Strand 3	A	340	344	parallel
Strand 4	A	363	364	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	29	35	first strand
Strand 2	B	38	42	anti-parallel
Strand 3	B	71	75	anti-parallel
Strand 4	B	60	63	anti-parallel
Strand 5	B	51	55	anti-parallel
Strand 6	B	87	94	anti-parallel
Strand 7	B	29	35	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	96	99	first strand
Strand 2	B	125	128	anti-parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	107	108	first strand
Strand 2	B	222	226	parallel
Strand 3	B	194	198	parallel
Strand 4	B	257	260	parallel
Strand 5	B	314	320	parallel
Strand 6	B	166	169	parallel
Strand 7	B	340	344	parallel
Strand 8	B	363	364	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	28	33	first strand
Strand 2	C	40	42	anti-parallel
Strand 3	C	71	75	anti-parallel
Strand 4	C	60	66	anti-parallel
Strand 5	C	51	55	anti-parallel
Strand 6	C	87	94	anti-parallel
Strand 7	C	28	33	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	96	99	first strand
Strand 2	C	125	128	anti-parallel

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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	107	108	first strand
Strand 2	C	222	227	parallel
Strand 3	C	192	200	parallel
Strand 4	C	256	260	parallel
Strand 5	C	314	320	parallel
Strand 6	C	166	169	parallel
Strand 7	C	340	343	parallel
Strand 8	C	363	364	anti-parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	4	10	first strand
Strand 2	D	13	17	anti-parallel
Strand 3	D	58	63	anti-parallel
Strand 4	D	44	53	anti-parallel
Strand 5	D	29	34	anti-parallel
Strand 6	D	75	78	anti-parallel
Strand 7	D	4	10	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	84	86	first strand
Strand 2	D	115	117	anti-parallel

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There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	95	96	first strand
Strand 2	D	212	217	parallel
Strand 3	D	183	190	parallel
Strand 4	D	248	251	parallel
Strand 5	D	302	307	parallel
Strand 6	D	153	158	parallel
Strand 7	D	327	330	parallel
Strand 8	D	350	351	anti-parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	3	10	first strand
Strand 2	E	13	17	anti-parallel
Strand 3	E	58	63	anti-parallel
Strand 4	E	44	55	anti-parallel
Strand 5	E	28	34	anti-parallel
Strand 6	E	75	82	anti-parallel
Strand 7	E	3	10	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	84	86	first strand
Strand 2	E	115	117	anti-parallel

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There are 8 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	95	96	first strand
Strand 2	E	212	216	parallel
Strand 3	E	183	188	parallel
Strand 4	E	247	251	parallel
Strand 5	E	300	305	parallel
Strand 6	E	153	158	parallel
Strand 7	E	327	331	parallel
Strand 8	E	350	351	anti-parallel

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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	4	10	first strand
Strand 2	F	13	17	anti-parallel
Strand 3	F	58	63	anti-parallel
Strand 4	F	44	53	anti-parallel
Strand 5	F	29	34	anti-parallel
Strand 6	F	75	78	anti-parallel
Strand 7	F	4	10	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	85	86	first strand
Strand 2	F	115	116	anti-parallel

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There are 8 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	95	96	first strand
Strand 2	F	212	217	parallel
Strand 3	F	183	190	parallel
Strand 4	F	247	251	parallel
Strand 5	F	300	307	parallel
Strand 6	F	153	158	parallel
Strand 7	F	327	331	parallel
Strand 8	F	350	351	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	133	134	first strand
Strand 2	F	149	150	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	136	140	first strand
Strand 2	G	116	121	parallel
Strand 3	G	79	84	parallel
Strand 4	G	170	174	parallel
Strand 5	G	189	192	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	176	177	first strand
Strand 2	G	185	186	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7L1Q

Analysis of interatomic Contacts of Structural Units in PDB entry:
7L1Q