Analysis of interatomic Contacts of Structural Units in PDB entry:
7L24

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7L24 entry

There are 4 chains in PDB entry 7L24 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 7	ASN 293
B	ASP 7	ASN 293
C	ILE 8	ASN 293
D	ILE 8	LYS 292

There are 53 helices in PDB entry 7L24. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	12	16	Right-handed alpha
Helix 2	AA2	A	56	68	Right-handed alpha
Helix 3	AA3	A	99	107	Right-handed alpha
Helix 4	AA4	A	110	131	Right-handed alpha
Helix 5	AA5	A	139	141	Right-handed 310
Helix 6	AA6	A	156	169	Right-handed alpha
Helix 7	AA7	A	180	189	Right-handed alpha
Helix 8	AA8	A	195	211	Right-handed alpha
Helix 9	AA9	A	219	229	Right-handed alpha
Helix 10	AB1	A	244	255	Right-handed alpha
Helix 11	AB2	A	264	270	Right-handed alpha
Helix 12	AB3	A	271	276	Right-handed alpha
Helix 13	AB4	A	281	293	Right-handed alpha
Helix 14	AB5	B	12	16	Right-handed alpha
Helix 15	AB6	B	55	68	Right-handed alpha
Helix 16	AB7	B	99	107	Right-handed alpha
Helix 17	AB8	B	110	131	Right-handed alpha
Helix 18	AB9	B	139	141	Right-handed 310
Helix 19	AC1	B	156	161	Right-handed alpha
Helix 20	AC2	B	175	179	Right-handed 310
Helix 21	AC3	B	180	190	Right-handed alpha
Helix 22	AC4	B	195	211	Right-handed alpha
Helix 23	AC5	B	219	229	Right-handed alpha
Helix 24	AC6	B	244	255	Right-handed alpha
Helix 25	AC7	B	264	270	Right-handed alpha
Helix 26	AC8	B	271	276	Right-handed alpha
Helix 27	AC9	B	281	291	Right-handed alpha
Helix 28	AD1	C	56	68	Right-handed alpha
Helix 29	AD2	C	99	107	Right-handed alpha
Helix 30	AD3	C	110	131	Right-handed alpha
Helix 31	AD4	C	139	141	Right-handed 310
Helix 32	AD5	C	156	164	Right-handed alpha
Helix 33	AD6	C	168	173	Right-handed alpha
Helix 34	AD7	C	180	189	Right-handed alpha
Helix 35	AD8	C	195	211	Right-handed alpha
Helix 36	AD9	C	219	229	Right-handed alpha
Helix 37	AE1	C	244	255	Right-handed alpha
Helix 38	AE2	C	264	270	Right-handed alpha
Helix 39	AE3	C	271	276	Right-handed alpha
Helix 40	AE4	C	281	291	Right-handed alpha
Helix 41	AE5	D	12	16	Right-handed alpha
Helix 42	AE6	D	56	69	Right-handed alpha
Helix 43	AE7	D	99	107	Right-handed alpha
Helix 44	AE8	D	110	131	Right-handed alpha
Helix 45	AE9	D	139	141	Right-handed 310
Helix 46	AF1	D	156	172	Right-handed alpha
Helix 47	AF2	D	180	189	Right-handed alpha
Helix 48	AF3	D	195	211	Right-handed alpha
Helix 49	AF4	D	219	229	Right-handed alpha
Helix 50	AF5	D	244	255	Right-handed alpha
Helix 51	AF6	D	264	270	Right-handed alpha
Helix 52	AF7	D	271	276	Right-handed alpha
Helix 53	AF8	D	281	291	Right-handed alpha

There are 8 sheets in PDB entry 7L24. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	17	25	first strand
Strand 2	A	30	36	anti-parallel
Strand 3	A	42	49	anti-parallel
Strand 4	A	86	92	anti-parallel
Strand 5	A	77	83	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	97	98	first strand
Strand 2	A	143	145	anti-parallel
Strand 3	A	151	153	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	17	22	first strand
Strand 2	B	31	36	anti-parallel
Strand 3	B	42	49	anti-parallel
Strand 4	B	86	92	anti-parallel
Strand 5	B	77	83	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	97	98	first strand
Strand 2	B	143	145	anti-parallel
Strand 3	B	151	153	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	17	25	first strand
Strand 2	C	30	36	anti-parallel
Strand 3	C	42	49	anti-parallel
Strand 4	C	86	92	anti-parallel
Strand 5	C	77	83	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	97	98	first strand
Strand 2	C	143	145	anti-parallel
Strand 3	C	151	153	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	17	21	first strand
Strand 2	D	32	36	anti-parallel
Strand 3	D	42	49	anti-parallel
Strand 4	D	86	92	anti-parallel
Strand 5	D	77	83	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	97	98	first strand
Strand 2	D	143	145	anti-parallel
Strand 3	D	151	153	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7L24

Analysis of interatomic Contacts of Structural Units in PDB entry:
7L24