Analysis of interatomic Contacts of Structural Units in PDB entry:
7L29

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7L29 entry

There are 4 chains in PDB entry 7L29 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 669	GLU 1093
B	LYS 669	ARG 1095
C	PRO 670	ARG 1095
D	LYS 669	LEU 817

There are 87 helices in PDB entry 7L29. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	682	687	Right-handed alpha
Helix 2	AA2	A	688	691	Right-handed 310
Helix 3	AA3	A	695	704	Right-handed alpha
Helix 4	AA4	A	709	723	Right-handed alpha
Helix 5	AA5	A	723	728	Right-handed alpha
Helix 6	AA6	A	731	745	Right-handed alpha
Helix 7	AA7	A	753	770	Right-handed alpha
Helix 8	AA8	A	816	820	Right-handed 310
Helix 9	AA9	A	822	836	Right-handed alpha
Helix 10	AB1	A	844	851	Right-handed alpha
Helix 11	AB2	A	853	859	Right-handed alpha
Helix 12	AB3	A	863	880	Right-handed alpha
Helix 13	AB4	A	881	884	Right-handed 310
Helix 14	AB5	A	890	907	Right-handed alpha
Helix 15	AB6	A	908	911	Right-handed 310
Helix 16	AB7	A	912	925	Right-handed alpha
Helix 17	AB8	A	934	951	Right-handed alpha
Helix 18	AB9	A	952	956	Right-handed 310
Helix 19	AC1	A	957	982	Right-handed alpha
Helix 20	AC2	A	996	1008	Right-handed alpha
Helix 21	AC3	A	1008	1019	Right-handed alpha
Helix 22	AC4	A	1073	1093	Right-handed alpha
Helix 23	AC5	B	682	687	Right-handed alpha
Helix 24	AC6	B	688	691	Right-handed 310
Helix 25	AC7	B	695	704	Right-handed alpha
Helix 26	AC8	B	709	722	Right-handed alpha
Helix 27	AC9	B	723	728	Right-handed alpha
Helix 28	AD1	B	731	745	Right-handed alpha
Helix 29	AD2	B	753	770	Right-handed alpha
Helix 30	AD3	B	816	820	Right-handed 310
Helix 31	AD4	B	822	836	Right-handed alpha
Helix 32	AD5	B	844	851	Right-handed alpha
Helix 33	AD6	B	853	859	Right-handed alpha
Helix 34	AD7	B	863	880	Right-handed alpha
Helix 35	AD8	B	881	884	Right-handed 310
Helix 36	AD9	B	890	907	Right-handed alpha
Helix 37	AE1	B	908	911	Right-handed 310
Helix 38	AE2	B	912	925	Right-handed alpha
Helix 39	AE3	B	934	951	Right-handed alpha
Helix 40	AE4	B	952	956	Right-handed 310
Helix 41	AE5	B	957	982	Right-handed alpha
Helix 42	AE6	B	996	1008	Right-handed alpha
Helix 43	AE7	B	1008	1019	Right-handed alpha
Helix 44	AE8	B	1073	1095	Right-handed alpha
Helix 45	AE9	C	682	687	Right-handed alpha
Helix 46	AF1	C	688	691	Right-handed 310
Helix 47	AF2	C	695	704	Right-handed alpha
Helix 48	AF3	C	709	722	Right-handed alpha
Helix 49	AF4	C	723	728	Right-handed alpha
Helix 50	AF5	C	731	745	Right-handed alpha
Helix 51	AF6	C	753	770	Right-handed alpha
Helix 52	AF7	C	816	820	Right-handed 310
Helix 53	AF8	C	822	836	Right-handed alpha
Helix 54	AF9	C	844	851	Right-handed alpha
Helix 55	AG1	C	853	859	Right-handed alpha
Helix 56	AG2	C	863	880	Right-handed alpha
Helix 57	AG3	C	881	884	Right-handed 310
Helix 58	AG4	C	890	907	Right-handed alpha
Helix 59	AG5	C	908	911	Right-handed 310
Helix 60	AG6	C	912	926	Right-handed alpha
Helix 61	AG7	C	934	951	Right-handed alpha
Helix 62	AG8	C	952	956	Right-handed 310
Helix 63	AG9	C	957	982	Right-handed alpha
Helix 64	AH1	C	996	1008	Right-handed alpha
Helix 65	AH2	C	1008	1019	Right-handed alpha
Helix 66	AH3	C	1073	1095	Right-handed alpha
Helix 67	AH4	D	682	687	Right-handed alpha
Helix 68	AH5	D	695	704	Right-handed alpha
Helix 69	AH6	D	709	722	Right-handed alpha
Helix 70	AH7	D	723	728	Right-handed alpha
Helix 71	AH8	D	731	745	Right-handed alpha
Helix 72	AH9	D	753	770	Right-handed alpha
Helix 73	AI1	D	816	820	Right-handed 310
Helix 74	AI2	D	822	836	Right-handed alpha
Helix 75	AI3	D	844	851	Right-handed alpha
Helix 76	AI4	D	853	859	Right-handed alpha
Helix 77	AI5	D	863	880	Right-handed alpha
Helix 78	AI6	D	881	884	Right-handed 310
Helix 79	AI7	D	890	907	Right-handed alpha
Helix 80	AI8	D	908	911	Right-handed 310
Helix 81	AI9	D	912	925	Right-handed alpha
Helix 82	AJ1	D	934	951	Right-handed alpha
Helix 83	AJ2	D	952	956	Right-handed 310
Helix 84	AJ3	D	957	982	Right-handed alpha
Helix 85	AJ4	D	996	1008	Right-handed alpha
Helix 86	AJ5	D	1008	1019	Right-handed alpha
Helix 87	AJ6	D	1073	1094	Right-handed alpha

There are 8 sheets in PDB entry 7L29. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	772	773	first strand
Strand 2	A	814	815	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1025	1026	first strand
Strand 2	A	1071	1072	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	772	773	first strand
Strand 2	B	814	815	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1025	1026	first strand
Strand 2	B	1071	1072	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	772	773	first strand
Strand 2	C	814	815	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1025	1026	first strand
Strand 2	C	1071	1072	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	772	773	first strand
Strand 2	D	814	815	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1025	1026	first strand
Strand 2	D	1071	1072	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7L29

Analysis of interatomic Contacts of Structural Units in PDB entry:
7L29