Analysis of interatomic Contacts of Structural Units in PDB entry:
7L3V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7L3V entry

There is 1 chain in PDB entry 7L3V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 10MET 622
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 7L3V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 13Right-handed 310
Helix 2
AA2
A
19 23Right-handed 310
Helix 3
AA3
A
24 39Right-handed alpha
Helix 4
AA4
A
49 63Right-handed alpha
Helix 5
AA5
A
88 90Right-handed 310
Helix 6
AA6
A
98 103Right-handed alpha
Helix 7
AA7
A
118 128Right-handed alpha
Helix 8
AA8
A
163 174Right-handed alpha
Helix 9
AA9
A
177 185Right-handed alpha
Helix 10
AB1
A
213 217Right-handed 310
Helix 11
AB2
A
223 225Right-handed 310
Helix 12
AB3
A
235 240Right-handed alpha
Helix 13
AB4
A
248 259Right-handed alpha
Helix 14
AB5
A
289 295Right-handed alpha
Helix 15
AB6
A
344 352Right-handed alpha
Helix 16
AB7
A
411 413Right-handed 310
Helix 17
AB8
A
449 460Right-handed alpha
Helix 18
AB9
A
479 482Right-handed 310
Helix 19
AC1
A
489 500Right-handed alpha
Helix 20
AC2
A
529 532Right-handed 310
Helix 21
AC3
A
533 545Right-handed alpha
Helix 22
AC4
A
573 578Right-handed alpha
Helix 23
AC5
A
581 600Right-handed alpha
Helix 24
AC6
A
601 604Right-handed 310
Helix 25
AC7
A
605 622Right-handed alpha
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There are 8 sheets in PDB entry 7L3V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 17first strand
Strand 2
A
42 45parallel
Strand 3
A
138 146parallel
Strand 4
A
155 161anti-parallel
Strand 5
A
190 195parallel
Strand 6
A
227 231parallel
Strand 7
A
218 222anti-parallel
Strand 8
A
92 95parallel
Strand 9
A
116 117parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 17first strand
Strand 2
A
42 45parallel
Strand 3
A
138 146parallel
Strand 4
A
175 176anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 68first strand
Strand 2
A
76 78anti-parallel
Strand 3
A
356 358parallel
Strand 4
A
405 409anti-parallel
Strand 5
A
331 335anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
261 263first strand
Strand 2
A
313 317anti-parallel
Strand 3
A
323 326anti-parallel
Strand 4
A
426 434anti-parallel
Strand 5
A
277 283parallel
Strand 6
A
266 271anti-parallel
Strand 7
A
304 309anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
261 263first strand
Strand 2
A
313 317anti-parallel
Strand 3
A
323 326anti-parallel
Strand 4
A
426 434anti-parallel
Strand 5
A
510 514parallel
Strand 6
A
444 446anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
368 369first strand
Strand 2
A
361 363anti-parallel
Strand 3
A
383 384anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
461 462first strand
Strand 2
A
476 477anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
550 553first strand
Strand 2
A
556 559anti-parallel
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