Analysis of interatomic Contacts of Structural Units in PDB entry:
7L48


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7L48 entry

There are 3 chains in PDB entry 7L48 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 4THR 525
B
 THR 7THR 525
E
 C 22 G 207
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 7L48. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
21 42Right-handed alpha
Helix 2
AA2
A
51 55Right-handed alpha
Helix 3
AA3
A
70 75Right-handed alpha
Helix 4
AA4
A
79 89Right-handed alpha
Helix 5
AA5
A
94 126Right-handed alpha
Helix 6
AA6
A
133 153Right-handed alpha
Helix 7
AA7
A
156 168Right-handed alpha
Helix 8
AA8
A
171 177Right-handed alpha
Helix 9
AA9
A
256 261Right-handed alpha
Helix 10
AB1
A
270 280Right-handed alpha
Helix 11
AB2
A
351 367Right-handed alpha
Helix 12
AB3
A
382 414Right-handed alpha
Helix 13
AB4
A
423 428Right-handed alpha
Helix 14
AB5
A
444 458Right-handed alpha
Helix 15
AB6
A
486 493Right-handed alpha
Helix 16
AB7
A
508 519Right-handed alpha
Helix 17
AB8
B
21 42Right-handed alpha
Helix 18
AB9
B
52 58Right-handed alpha
Helix 19
AC1
B
69 76Right-handed alpha
Helix 20
AC2
B
78 89Right-handed alpha
Helix 21
AC3
B
94 126Right-handed alpha
Helix 22
AC4
B
133 144Right-handed alpha
Helix 23
AC5
B
144 153Right-handed alpha
Helix 24
AC6
B
155 170Right-handed alpha
Helix 25
AC7
B
171 176Right-handed alpha
Helix 26
AC8
B
271 281Right-handed alpha
Helix 27
AC9
B
348 366Right-handed alpha
Helix 28
AD1
B
382 415Right-handed alpha
Helix 29
AD2
B
423 429Right-handed alpha
Helix 30
AD3
B
444 459Right-handed alpha
Helix 31
AD4
B
486 493Right-handed alpha
Helix 32
AD5
B
510 518Right-handed alpha
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There are 7 sheets in PDB entry 7L48. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 218first strand
Strand 2
A
250 254anti-parallel
Strand 3
A
5 18anti-parallel
Strand 4
A
303 311anti-parallel
Strand 5
A
288 289anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 50first strand
Strand 2
A
62 64parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
343 345first strand
Strand 2
A
334 337anti-parallel
Strand 3
A
322 325anti-parallel
Strand 4
A
418 421parallel
Strand 5
A
462 465parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
208 209first strand
Strand 2
B
214 218anti-parallel
Strand 3
B
250 255anti-parallel
Strand 4
B
8 14anti-parallel
Strand 5
B
304 308anti-parallel
Strand 6
B
287 289anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
258 259first strand
Strand 2
B
265 266anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
344 345first strand
Strand 2
B
333 337anti-parallel
Strand 3
B
318 327anti-parallel
Strand 4
B
416 421parallel
Strand 5
B
462 464parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
498 500first strand
Strand 2
B
505 507anti-parallel
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