Analysis of interatomic Contacts of Structural Units in PDB entry:
7L59


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7L59 entry

There is 1 chain in PDB entry 7L59 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 9LEU 630
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 7L59. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 16Right-handed 310
Helix 2
AA2
A
46 52Right-handed alpha
Helix 3
AA3
A
54 59Right-handed alpha
Helix 4
AA4
A
62 67Right-handed alpha
Helix 5
AA5
A
128 140Right-handed alpha
Helix 6
AA6
A
144 160Right-handed alpha
Helix 7
AA7
A
196 200Right-handed 310
Helix 8
AA8
A
201 212Right-handed alpha
Helix 9
AA9
A
249 260Right-handed alpha
Helix 10
AB1
A
290 333Right-handed alpha
Helix 11
AB2
A
342 348Right-handed alpha
Helix 12
AB3
A
348 355Right-handed alpha
Helix 13
AB4
A
377 391Right-handed alpha
Helix 14
AB5
A
408 413Right-handed alpha
Helix 15
AB6
A
414 418Right-handed 310
Helix 16
AB7
A
419 424Right-handed alpha
Helix 17
AB8
A
445 450Right-handed 310
Helix 18
AB9
A
470 482Right-handed alpha
Helix 19
AC1
A
490 511Right-handed alpha
Helix 20
AC2
A
517 525Right-handed alpha
Helix 21
AC3
A
548 556Right-handed alpha
Helix 22
AC4
A
558 563Right-handed alpha
Helix 23
AC5
A
580 588Right-handed alpha
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There are 5 sheets in PDB entry 7L59. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 24first strand
Strand 2
A
224 227anti-parallel
Strand 3
A
40 44anti-parallel
Strand 4
A
29 33anti-parallel
Strand 5
A
113 119anti-parallel
Strand 6
A
102 108anti-parallel
Strand 7
A
82 89anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
194 195first strand
Strand 2
A
176 183anti-parallel
Strand 3
A
164 170anti-parallel
Strand 4
A
274 283anti-parallel
Strand 5
A
263 271anti-parallel
Strand 6
A
213 216anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
368 371first strand
Strand 2
A
360 365anti-parallel
Strand 3
A
437 443anti-parallel
Strand 4
A
425 430anti-parallel
Strand 5
A
404 406anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
543 547first strand
Strand 2
A
531 534anti-parallel
Strand 3
A
625 628anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
596 598first strand
Strand 2
A
608 610anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il