Analysis of interatomic Contacts of Structural Units in PDB entry:
7L5I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7L5I entry

There is 1 chain in PDB entry 7L5I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 43ALA 825
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 7L5I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
79 83Right-handed 310
Helix 2
AA2
A
84 91Right-handed alpha
Helix 3
AA3
A
102 107Right-handed alpha
Helix 4
AA4
A
112 116Right-handed 310
Helix 5
AA5
A
125 144Right-handed alpha
Helix 6
AA6
A
145 147Right-handed 310
Helix 7
AA7
A
164 176Right-handed alpha
Helix 8
AA8
A
190 200Right-handed alpha
Helix 9
AA9
A
210 218Right-handed alpha
Helix 10
AB1
A
227 232Right-handed alpha
Helix 11
AB2
A
241 253Right-handed alpha
Helix 12
AB3
A
265 271Right-handed alpha
Helix 13
AB4
A
282 297Right-handed alpha
Helix 14
AB5
A
301 308Right-handed alpha
Helix 15
AB6
A
311 320Right-handed alpha
Helix 16
AB7
A
329 338Right-handed alpha
Helix 17
AB8
A
340 354Right-handed alpha
Helix 18
AB9
A
362 366Right-handed 310
Helix 19
AC1
A
370 385Right-handed alpha
Helix 20
AC2
A
442 449Right-handed alpha
Helix 21
AC3
A
475 480Right-handed alpha
Helix 22
AC4
A
482 490Right-handed alpha
Helix 23
AC5
A
506 510Right-handed 310
Helix 24
AC6
A
518 522Right-handed 310
Helix 25
AC7
A
551 563Right-handed alpha
Helix 26
AC8
A
565 571Right-handed alpha
Helix 27
AC9
A
574 593Right-handed alpha
Helix 28
AD1
A
599 607Right-handed alpha
Helix 29
AD2
A
615 621Right-handed alpha
Helix 30
AD3
A
624 630Right-handed alpha
Helix 31
AD4
A
647 654Right-handed alpha
Helix 32
AD5
A
670 674Right-handed 310
Helix 33
AD6
A
698 704Right-handed 310
Helix 34
AD7
A
715 721Right-handed alpha
Helix 35
AD8
A
779 783Right-handed 310
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There are 8 sheets in PDB entry 7L5I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 52first strand
Strand 2
A
55 62anti-parallel
Strand 3
A
65 71anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 123first strand
Strand 2
A
99 101anti-parallel
Strand 3
A
512 515anti-parallel
Strand 4
A
495 500parallel
Strand 5
A
468 472parallel
Strand 6
A
149 150parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 183first strand
Strand 2
A
438 439parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
274 277first strand
Strand 2
A
256 261parallel
Strand 3
A
220 224parallel
Strand 4
A
356 360parallel
Strand 5
A
393 395parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
238 239first strand
Strand 2
A
524 529parallel
Strand 3
A
535 539anti-parallel
Strand 4
A
610 611anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
309 310first strand
Strand 2
A
643 644parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
453 456first strand
Strand 2
A
459 462anti-parallel
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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
774 775first strand
Strand 2
A
738 745parallel
Strand 3
A
729 733anti-parallel
Strand 4
A
802 807anti-parallel
Strand 5
A
680 683anti-parallel
Strand 6
A
753 756parallel
Strand 7
A
711 714anti-parallel
Strand 8
A
738 745parallel
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