Analysis of interatomic Contacts of Structural Units in PDB entry:
7L68


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7L68 entry

There are 2 chains in PDB entry 7L68 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 629ILE 761
B
 ALA 627ILE 761
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 7L68. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
648 652Right-handed 310
Helix 2
AA2
A
654 665Right-handed alpha
Helix 3
AA3
A
674 689Right-handed alpha
Helix 4
AA4
A
728 732Right-handed 310
Helix 5
AA5
B
631 635Right-handed 310
Helix 6
AA6
B
648 652Right-handed 310
Helix 7
AA7
B
654 665Right-handed alpha
Helix 8
AA8
B
674 688Right-handed alpha
Helix 9
AA9
B
728 732Right-handed 310
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There are 4 sheets in PDB entry 7L68. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
641 645first strand
Strand 2
A
756 761anti-parallel
Strand 3
A
694 703parallel
Strand 4
A
707 710anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
668 669first strand
Strand 2
A
756 761anti-parallel
Strand 3
A
694 703parallel
Strand 4
A
735 739anti-parallel
Strand 5
A
746 749anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
641 645first strand
Strand 2
B
756 761anti-parallel
Strand 3
B
694 703parallel
Strand 4
B
707 709anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
668 669first strand
Strand 2
B
756 761anti-parallel
Strand 3
B
694 703parallel
Strand 4
B
735 739anti-parallel
Strand 5
B
746 749anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il