Analysis of interatomic Contacts of Structural Units in PDB entry:
7L6O

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7L6O entry

There are 6 chains in PDB entry 7L6O (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
a	ALA 31	ARG 506
b	PHE 507	ASP 652
c	ALA 31	ARG 506
d	PHE 507	ASP 652
e	ALA 31	ARG 506
f	PHE 507	ASP 652

There are 46 helices in PDB entry 7L6O. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	a	59	63	Right-handed 310
Helix 2	AA2	a	99	117	Right-handed alpha
Helix 3	AA3	a	122	126	Right-handed 310
Helix 4	AA4	a	195	198	Right-handed 310
Helix 5	AA5	a	335	353	Right-handed alpha
Helix 6	AA6	a	368	373	Right-handed alpha
Helix 7	AA7	a	377	381	Right-handed 310
Helix 8	AA8	a	397	401	Right-handed alpha
Helix 9	AA9	a	476	484	Right-handed alpha
Helix 10	AB1	b	517	522	Right-handed alpha
Helix 11	AB2	b	524	530	Right-handed alpha
Helix 12	AB3	b	559	584	Right-handed alpha
Helix 13	AB4	b	606	612	Right-handed alpha
Helix 14	AB5	b	615	624	Right-handed alpha
Helix 15	AB6	b	625	627	Right-handed 310
Helix 16	AB7	b	628	636	Right-handed alpha
Helix 17	AB8	b	638	651	Right-handed alpha
Helix 18	AB9	c	59	63	Right-handed 310
Helix 19	AC1	c	99	117	Right-handed alpha
Helix 20	AC2	c	195	198	Right-handed 310
Helix 21	AC3	c	335	351	Right-handed alpha
Helix 22	AC4	c	368	373	Right-handed alpha
Helix 23	AC5	c	377	381	Right-handed 310
Helix 24	AC6	c	397	401	Right-handed alpha
Helix 25	AC7	c	476	484	Right-handed alpha
Helix 26	AC8	d	517	522	Right-handed alpha
Helix 27	AC9	d	524	530	Right-handed alpha
Helix 28	AD1	d	559	585	Right-handed alpha
Helix 29	AD2	d	606	612	Right-handed alpha
Helix 30	AD3	d	615	624	Right-handed alpha
Helix 31	AD4	d	628	636	Right-handed alpha
Helix 32	AD5	d	638	651	Right-handed alpha
Helix 33	AD6	e	98	117	Right-handed alpha
Helix 34	AD7	e	195	198	Right-handed 310
Helix 35	AD8	e	335	353	Right-handed alpha
Helix 36	AD9	e	368	373	Right-handed alpha
Helix 37	AE1	e	397	401	Right-handed alpha
Helix 38	AE2	e	476	481	Right-handed alpha
Helix 39	AE3	e	482	484	Right-handed 310
Helix 40	AE4	f	517	522	Right-handed alpha
Helix 41	AE5	f	524	530	Right-handed alpha
Helix 42	AE6	f	558	584	Right-handed alpha
Helix 43	AE7	f	607	612	Right-handed alpha
Helix 44	AE8	f	615	624	Right-handed alpha
Helix 45	AE9	f	628	636	Right-handed alpha
Helix 46	AF1	f	638	651	Right-handed alpha

There are 27 sheets in PDB entry 7L6O. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	494	499	first strand
Strand 2	a	35	40	anti-parallel
Strand 3	b	592	597	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	45	47	first strand
Strand 2	a	486	491	anti-parallel
Strand 3	a	223	228	anti-parallel
Strand 4	a	242	245	anti-parallel
Strand 5	a	84	85	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	53	56	first strand
Strand 2	a	215	218	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	91	94	first strand
Strand 2	a	236	239	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	169	177	first strand
Strand 2	a	142	162	anti-parallel
Strand 3	a	129	139	anti-parallel
Strand 4	a	190	193	anti-parallel
Strand 5	a	181	183	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	202	203	first strand
Strand 2	a	434	435	parallel
Strand 3	a	423	424	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	259	261	first strand
Strand 2	a	444	456	anti-parallel
Strand 3	a	284	297	anti-parallel
Strand 4	a	465	470	first strand
Strand 5	a	358	361	parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	271	273	first strand
Strand 2	a	284	297	anti-parallel
Strand 3	a	444	456	anti-parallel
Strand 4	a	330	334	first strand
Strand 5	a	413	420	anti-parallel
Strand 6	a	383	385	anti-parallel
Strand 7	a	374	375	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	304	307	first strand
Strand 2	a	317	320	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	494	499	first strand
Strand 2	c	35	40	anti-parallel
Strand 3	d	591	597	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	45	47	first strand
Strand 2	c	486	491	anti-parallel
Strand 3	c	223	228	anti-parallel
Strand 4	c	242	245	anti-parallel
Strand 5	c	84	85	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	75	76	first strand
Strand 2	c	53	56	parallel
Strand 3	c	215	218	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	91	94	first strand
Strand 2	c	236	239	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	169	177	first strand
Strand 2	c	142	162	anti-parallel
Strand 3	c	129	139	anti-parallel
Strand 4	c	190	193	anti-parallel
Strand 5	c	181	183	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	202	203	first strand
Strand 2	c	434	435	parallel
Strand 3	c	423	424	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	259	261	first strand
Strand 2	c	444	456	anti-parallel
Strand 3	c	284	297	anti-parallel
Strand 4	c	465	470	first strand
Strand 5	c	358	361	parallel

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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	271	273	first strand
Strand 2	c	284	297	anti-parallel
Strand 3	c	444	456	anti-parallel
Strand 4	c	330	334	first strand
Strand 5	c	413	420	anti-parallel
Strand 6	c	383	385	anti-parallel
Strand 7	c	374	375	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	304	307	first strand
Strand 2	c	317	320	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	e	494	499	first strand
Strand 2	e	35	40	anti-parallel
Strand 3	f	591	597	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	e	45	47	first strand
Strand 2	e	486	491	anti-parallel
Strand 3	e	223	228	anti-parallel
Strand 4	e	242	245	anti-parallel
Strand 5	e	84	85	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	e	53	56	first strand
Strand 2	e	215	218	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	e	91	94	first strand
Strand 2	e	236	239	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	e	169	177	first strand
Strand 2	e	142	162	anti-parallel
Strand 3	e	129	139	anti-parallel
Strand 4	e	190	193	anti-parallel
Strand 5	e	181	183	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	e	202	203	first strand
Strand 2	e	434	435	parallel
Strand 3	e	423	424	anti-parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	e	259	261	first strand
Strand 2	e	444	456	anti-parallel
Strand 3	e	284	297	anti-parallel
Strand 4	e	465	470	first strand
Strand 5	e	358	361	parallel

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There are 7 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	e	271	273	first strand
Strand 2	e	284	297	anti-parallel
Strand 3	e	444	456	anti-parallel
Strand 4	e	330	334	first strand
Strand 5	e	413	421	anti-parallel
Strand 6	e	382	385	anti-parallel
Strand 7	e	374	375	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	e	301	306	first strand
Strand 2	e	318	323	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7L6O

Analysis of interatomic Contacts of Structural Units in PDB entry:
7L6O