Analysis of interatomic Contacts of Structural Units in PDB entry:
7L6U

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7L6U entry

There are 5 chains in PDB entry 7L6U (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 11	THR 321
B	PRO 11	THR 321
C	PRO 11	THR 321
D	PRO 11	THR 321
E	PRO 11	THR 321

There are 45 helices in PDB entry 7L6U. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	50	54	Right-handed 310
Helix 2	AA2	A	63	68	Right-handed alpha
Helix 3	AA3	A	118	121	Right-handed 310
Helix 4	AA4	A	202	207	Right-handed alpha
Helix 5	AA5	A	209	220	Right-handed alpha
Helix 6	AA6	A	221	225	Right-handed 310
Helix 7	AA7	A	227	253	Right-handed alpha
Helix 8	AA8	A	260	285	Right-handed alpha
Helix 9	AA9	A	294	321	Right-handed alpha
Helix 10	AB1	B	50	54	Right-handed 310
Helix 11	AB2	B	63	68	Right-handed alpha
Helix 12	AB3	B	118	121	Right-handed 310
Helix 13	AB4	B	202	207	Right-handed alpha
Helix 14	AB5	B	209	220	Right-handed alpha
Helix 15	AB6	B	221	225	Right-handed 310
Helix 16	AB7	B	227	253	Right-handed alpha
Helix 17	AB8	B	260	285	Right-handed alpha
Helix 18	AB9	B	294	321	Right-handed alpha
Helix 19	AC1	C	50	54	Right-handed 310
Helix 20	AC2	C	63	68	Right-handed alpha
Helix 21	AC3	C	118	121	Right-handed 310
Helix 22	AC4	C	202	207	Right-handed alpha
Helix 23	AC5	C	209	220	Right-handed alpha
Helix 24	AC6	C	221	225	Right-handed 310
Helix 25	AC7	C	227	253	Right-handed alpha
Helix 26	AC8	C	260	285	Right-handed alpha
Helix 27	AC9	C	294	321	Right-handed alpha
Helix 28	AD1	D	50	54	Right-handed 310
Helix 29	AD2	D	63	68	Right-handed alpha
Helix 30	AD3	D	118	121	Right-handed 310
Helix 31	AD4	D	202	207	Right-handed alpha
Helix 32	AD5	D	209	220	Right-handed alpha
Helix 33	AD6	D	221	225	Right-handed 310
Helix 34	AD7	D	227	253	Right-handed alpha
Helix 35	AD8	D	260	285	Right-handed alpha
Helix 36	AD9	D	294	321	Right-handed alpha
Helix 37	AE1	E	50	54	Right-handed 310
Helix 38	AE2	E	63	68	Right-handed alpha
Helix 39	AE3	E	118	121	Right-handed 310
Helix 40	AE4	E	202	207	Right-handed alpha
Helix 41	AE5	E	209	220	Right-handed alpha
Helix 42	AE6	E	221	225	Right-handed 310
Helix 43	AE7	E	227	253	Right-handed alpha
Helix 44	AE8	E	260	285	Right-handed alpha
Helix 45	AE9	E	294	321	Right-handed alpha

There are 15 sheets in PDB entry 7L6U. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	56	58	first strand
Strand 2	A	90	94	anti-parallel
Strand 3	A	99	111	anti-parallel
Strand 4	A	32	44	anti-parallel
Strand 5	A	14	27	anti-parallel
Strand 6	A	140	146	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	76	78	first strand
Strand 2	A	123	132	anti-parallel
Strand 3	A	187	199	anti-parallel
Strand 4	A	160	162	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	76	78	first strand
Strand 2	A	123	132	anti-parallel
Strand 3	A	187	199	anti-parallel
Strand 4	A	167	174	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	56	58	first strand
Strand 2	B	90	94	anti-parallel
Strand 3	B	99	111	anti-parallel
Strand 4	B	32	44	anti-parallel
Strand 5	B	14	27	anti-parallel
Strand 6	B	140	146	parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	76	78	first strand
Strand 2	B	123	132	anti-parallel
Strand 3	B	187	199	anti-parallel
Strand 4	B	160	162	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	76	78	first strand
Strand 2	B	123	132	anti-parallel
Strand 3	B	187	199	anti-parallel
Strand 4	B	167	174	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	56	58	first strand
Strand 2	C	90	94	anti-parallel
Strand 3	C	99	111	anti-parallel
Strand 4	C	32	44	anti-parallel
Strand 5	C	14	27	anti-parallel
Strand 6	C	140	146	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	76	78	first strand
Strand 2	C	123	132	anti-parallel
Strand 3	C	187	199	anti-parallel
Strand 4	C	160	162	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	76	78	first strand
Strand 2	C	123	132	anti-parallel
Strand 3	C	187	199	anti-parallel
Strand 4	C	167	174	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	56	58	first strand
Strand 2	D	90	94	anti-parallel
Strand 3	D	99	111	anti-parallel
Strand 4	D	32	44	anti-parallel
Strand 5	D	14	27	anti-parallel
Strand 6	D	140	146	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	76	78	first strand
Strand 2	D	123	132	anti-parallel
Strand 3	D	187	199	anti-parallel
Strand 4	D	160	162	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	76	78	first strand
Strand 2	D	123	132	anti-parallel
Strand 3	D	187	199	anti-parallel
Strand 4	D	167	174	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	56	58	first strand
Strand 2	E	90	94	anti-parallel
Strand 3	E	99	111	anti-parallel
Strand 4	E	32	44	anti-parallel
Strand 5	E	14	27	anti-parallel
Strand 6	E	140	146	parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	76	78	first strand
Strand 2	E	123	132	anti-parallel
Strand 3	E	187	199	anti-parallel
Strand 4	E	160	162	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	76	78	first strand
Strand 2	E	123	132	anti-parallel
Strand 3	E	187	199	anti-parallel
Strand 4	E	167	174	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7L6U

Analysis of interatomic Contacts of Structural Units in PDB entry:
7L6U