Analysis of interatomic Contacts of Structural Units in PDB entry:
7L6V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7L6V entry

There are 6 chains in PDB entry 7L6V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0THR 420
B
 GLN 1VAL 115
C
 PRO -3SER 122
D
 GLY -4SER 117
E
 GLY -1SER 120
F
 SER 0SER 125
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 7L6V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
53 57Right-handed 310
Helix 2
AA2
A
63 67Right-handed 310
Helix 3
AA3
A
80 100Right-handed alpha
Helix 4
AA4
A
101 114Right-handed alpha
Helix 5
AA5
A
130 132Right-handed 310
Helix 6
AA6
A
199 204Right-handed alpha
Helix 7
AA7
A
216 233Right-handed alpha
Helix 8
AA8
A
260 267Right-handed alpha
Helix 9
AA9
A
268 273Right-handed 310
Helix 10
AB1
A
275 299Right-handed alpha
Helix 11
AB2
A
309 322Right-handed alpha
Helix 12
AB3
A
334 347Right-handed alpha
Helix 13
AB4
A
350 359Right-handed alpha
Helix 14
AB5
A
395 399Right-handed 310
Helix 15
AB6
A
409 413Right-handed 310
Helix 16
AB7
B
28 32Right-handed 310
Helix 17
AB8
B
62 65Right-handed 310
Helix 18
AB9
C
-3 2Right-handed 310
Helix 19
AC1
C
86 90Right-handed 310
Helix 20
AC2
D
28 30Right-handed 310
Helix 21
AC3
D
86 90Right-handed 310
Helix 22
AC4
E
28 32Right-handed 310
Helix 23
AC5
E
86 90Right-handed 310
Helix 24
AC6
F
61 64Right-handed 310
Helix 25
AC7
F
73 75Right-handed 310
Helix 26
AC8
F
86 90Right-handed 310
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There are 19 sheets in PDB entry 7L6V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 148first strand
Strand 2
A
134 138anti-parallel
Strand 3
A
19 23anti-parallel
Strand 4
A
33 39anti-parallel
Strand 5
A
42 48anti-parallel
Strand 6
A
151 155parallel
Strand 7
A
184 187parallel
Strand 8
A
164 166anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 127first strand
Strand 2
A
302 303parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
213 214first strand
Strand 2
A
192 196anti-parallel
Strand 3
A
372 375anti-parallel
Strand 4
A
414 418anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
242 244first strand
Strand 2
A
257 259anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
324 325first strand
Strand 2
A
331 332anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 7first strand
Strand 2
B
18 25anti-parallel
Strand 3
B
78 83anti-parallel
Strand 4
B
69 73anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 60first strand
Strand 2
B
46 51anti-parallel
Strand 3
B
33 39anti-parallel
Strand 4
B
92 99anti-parallel
Strand 5
B
105 107anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 60first strand
Strand 2
B
46 51anti-parallel
Strand 3
B
33 39anti-parallel
Strand 4
B
92 99anti-parallel
Strand 5
B
111 113anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
3 7first strand
Strand 2
C
18 25anti-parallel
Strand 3
C
77 82anti-parallel
Strand 4
C
67 71anti-parallel
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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
10 13first strand
Strand 2
C
116 121parallel
Strand 3
C
91 98anti-parallel
Strand 4
C
33 39anti-parallel
Strand 5
C
46 52anti-parallel
Strand 6
C
57 59anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
10 13first strand
Strand 2
C
116 121parallel
Strand 3
C
91 98anti-parallel
Strand 4
C
111 112anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
3 8first strand
Strand 2
D
18 25anti-parallel
Strand 3
D
77 82anti-parallel
Strand 4
D
67 72anti-parallel
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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
10 12first strand
Strand 2
D
111 115parallel
Strand 3
D
91 99anti-parallel
Strand 4
D
32 39anti-parallel
Strand 5
D
46 51anti-parallel
Strand 6
D
57 59anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
10 12first strand
Strand 2
D
111 115parallel
Strand 3
D
91 99anti-parallel
Strand 4
D
105 107anti-parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
3 7first strand
Strand 2
E
18 25anti-parallel
Strand 3
E
77 82anti-parallel
Strand 4
E
68 72anti-parallel
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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
10 12first strand
Strand 2
E
114 118parallel
Strand 3
E
91 97anti-parallel
Strand 4
E
34 39anti-parallel
Strand 5
E
45 51anti-parallel
Strand 6
E
57 59anti-parallel
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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
3 7first strand
Strand 2
F
18 25anti-parallel
Strand 3
F
77 82anti-parallel
Strand 4
F
67 72anti-parallel
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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
10 12first strand
Strand 2
F
119 123parallel
Strand 3
F
91 99anti-parallel
Strand 4
F
32 39anti-parallel
Strand 5
F
45 51anti-parallel
Strand 6
F
57 59anti-parallel
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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
10 12first strand
Strand 2
F
119 123parallel
Strand 3
F
91 99anti-parallel
Strand 4
F
112 115anti-parallel
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