Analysis of interatomic Contacts of Structural Units in PDB entry:
7L6Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7L6Y entry

There are 2 chains in PDB entry 7L6Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 60ASN 268
B
 ASP 60ASN 268
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 7L6Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
60 68Right-handed 310
Helix 2
AA2
A
96 109Right-handed alpha
Helix 3
AA3
A
198 202Right-handed 310
Helix 4
AA4
A
203 210Right-handed alpha
Helix 5
AA5
A
211 213Right-handed 310
Helix 6
AA6
A
215 219Right-handed 310
Helix 7
AA7
A
231 241Right-handed alpha
Helix 8
AA8
A
242 243Right-handed 310
Helix 9
AA9
A
244 248Right-handed 310
Helix 10
AB1
B
60 68Right-handed 310
Helix 11
AB2
B
96 109Right-handed alpha
Helix 12
AB3
B
198 202Right-handed 310
Helix 13
AB4
B
203 210Right-handed alpha
Helix 14
AB5
B
211 213Right-handed 310
Helix 15
AB6
B
215 219Right-handed 310
Helix 16
AB7
B
231 241Right-handed alpha
Helix 17
AB8
B
242 243Right-handed 310
Helix 18
AB9
B
244 248Right-handed 310
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There are 2 sheets in PDB entry 7L6Y. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
119 121first strand
Strand 2
A
125 128anti-parallel
Strand 3
A
184 187anti-parallel
Strand 4
A
169 172anti-parallel
Strand 5
A
224 230anti-parallel
Strand 6
A
85 91anti-parallel
Strand 7
A
76 82anti-parallel
Strand 8
A
255 262anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
119 121first strand
Strand 2
B
125 128anti-parallel
Strand 3
B
184 187anti-parallel
Strand 4
B
169 172anti-parallel
Strand 5
B
224 230anti-parallel
Strand 6
B
85 91anti-parallel
Strand 7
B
76 82anti-parallel
Strand 8
B
255 262anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il