Analysis of interatomic Contacts of Structural Units in PDB entry:
7L8C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7L8C entry

There are 8 chains in PDB entry 7L8C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASN 33ARG 503
B
VAL 518LEU 663
C
ASN 33ARG 503
E
VAL 518ASP 664
D
ASN 33ARG 503
F
VAL 518ASP 664
H
UNK 2UNK 114
L
UNK 1UNK 107
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 7L8C. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
70 74Right-handed 310
Helix 2
AA2
A
94 97Right-handed 310
Helix 3
AA3
A
98 116Right-handed alpha
Helix 4
AA4
A
122 126Right-handed 310
Helix 5
AA5
A
335 354Right-handed alpha
Helix 6
AA6
A
368 373Right-handed alpha
Helix 7
AA7
A
425 429Right-handed 310
Helix 8
AA8
A
475 484Right-handed alpha
Helix 9
AA9
B
529 534Right-handed alpha
Helix 10
AB1
B
536 542Right-handed alpha
Helix 11
AB2
B
570 596Right-handed alpha
Helix 12
AB3
B
618 626Right-handed alpha
Helix 13
AB4
B
627 635Right-handed alpha
Helix 14
AB5
B
638 661Right-handed alpha
Helix 15
AB6
C
70 74Right-handed 310
Helix 16
AB7
C
94 97Right-handed 310
Helix 17
AB8
C
98 115Right-handed alpha
Helix 18
AB9
C
122 126Right-handed 310
Helix 19
AC1
C
139 151Right-handed 310
Helix 20
AC2
C
335 354Right-handed alpha
Helix 21
AC3
C
368 373Right-handed alpha
Helix 22
AC4
C
425 429Right-handed 310
Helix 23
AC5
C
475 484Right-handed alpha
Helix 24
AC6
E
529 534Right-handed alpha
Helix 25
AC7
E
536 542Right-handed alpha
Helix 26
AC8
E
572 596Right-handed alpha
Helix 27
AC9
E
618 626Right-handed alpha
Helix 28
AD1
E
627 635Right-handed alpha
Helix 29
AD2
E
638 663Right-handed alpha
Helix 30
AD3
D
94 97Right-handed 310
Helix 31
AD4
D
98 116Right-handed alpha
Helix 32
AD5
D
122 126Right-handed 310
Helix 33
AD6
D
139 151Right-handed 310
Helix 34
AD7
D
335 350Right-handed alpha
Helix 35
AD8
D
351 353Right-handed 310
Helix 36
AD9
D
368 373Right-handed alpha
Helix 37
AE1
D
425 429Right-handed 310
Helix 38
AE2
D
475 484Right-handed alpha
Helix 39
AE3
F
529 534Right-handed alpha
Helix 40
AE4
F
536 542Right-handed alpha
Helix 41
AE5
F
572 596Right-handed alpha
Helix 42
AE6
F
618 626Right-handed alpha
Helix 43
AE7
F
627 635Right-handed alpha
Helix 44
AE8
F
638 664Right-handed alpha
Helix 45
AE9
H
82 86Right-handed 310
Helix 46
AF1
H
98 102Right-handed 310
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There are 35 sheets in PDB entry 7L8C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
494 499first strand
Strand 2
A
35 40anti-parallel
Strand 3
B
603 609anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
45 47first strand
Strand 2
A
486 491anti-parallel
Strand 3
A
223 228anti-parallel
Strand 4
A
242 245anti-parallel
Strand 5
A
83 86anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
75 76first strand
Strand 2
A
53 57parallel
Strand 3
A
216 218anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
91 92first strand
Strand 2
A
238 239anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
169 176first strand
Strand 2
A
155 162anti-parallel
Strand 3
A
129 133anti-parallel
Strand 4
A
190 193anti-parallel
Strand 5
A
181 183anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
200 203first strand
Strand 2
A
432 435parallel
Strand 3
A
423 424anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
259 261first strand
Strand 2
A
441 457anti-parallel
Strand 3
A
465 470anti-parallel
Strand 4
A
358 361parallel
Strand 5
A
393 395anti-parallel
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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
259 261first strand
Strand 2
A
441 457anti-parallel
Strand 3
A
284 312anti-parallel
Strand 4
A
329 334anti-parallel
Strand 5
A
413 420anti-parallel
Strand 6
A
381 385anti-parallel
Strand 7
A
374 378anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
259 261first strand
Strand 2
A
441 457anti-parallel
Strand 3
A
284 312anti-parallel
Strand 4
A
271 274anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
315 323first strand
Strand 2
A
284 312anti-parallel
Strand 3
A
271 274anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
494 499first strand
Strand 2
C
35 40anti-parallel
Strand 3
E
603 609anti-parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
45 47first strand
Strand 2
C
486 491anti-parallel
Strand 3
C
223 228anti-parallel
Strand 4
C
242 245anti-parallel
Strand 5
C
83 86anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
53 55first strand
Strand 2
C
216 218anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
91 92first strand
Strand 2
C
238 239anti-parallel
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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
169 176first strand
Strand 2
C
155 162anti-parallel
Strand 3
C
129 133anti-parallel
Strand 4
C
190 193anti-parallel
Strand 5
C
181 183anti-parallel
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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
200 203first strand
Strand 2
C
432 435parallel
Strand 3
C
423 424anti-parallel
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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
259 261first strand
Strand 2
C
441 456anti-parallel
Strand 3
C
465 470anti-parallel
Strand 4
C
358 361parallel
Strand 5
C
393 395anti-parallel
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There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
259 261first strand
Strand 2
C
441 456anti-parallel
Strand 3
C
283 312anti-parallel
Strand 4
C
329 334anti-parallel
Strand 5
C
413 420anti-parallel
Strand 6
C
381 385anti-parallel
Strand 7
C
374 378anti-parallel
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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
259 261first strand
Strand 2
C
441 456anti-parallel
Strand 3
C
283 312anti-parallel
Strand 4
C
271 274anti-parallel
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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
315 323first strand
Strand 2
C
283 312anti-parallel
Strand 3
C
271 274anti-parallel
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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
494 499first strand
Strand 2
D
35 40anti-parallel
Strand 3
F
603 609anti-parallel
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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
45 47first strand
Strand 2
D
486 491anti-parallel
Strand 3
D
223 228anti-parallel
Strand 4
D
242 245anti-parallel
Strand 5
D
83 86anti-parallel
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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
75 76first strand
Strand 2
D
53 56parallel
Strand 3
D
216 218anti-parallel
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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
91 92first strand
Strand 2
D
238 239anti-parallel
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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
169 176first strand
Strand 2
D
155 162anti-parallel
Strand 3
D
129 133anti-parallel
Strand 4
D
190 193anti-parallel
Strand 5
D
181 183anti-parallel
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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
200 203first strand
Strand 2
D
432 435parallel
Strand 3
D
423 424anti-parallel
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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
259 261first strand
Strand 2
D
441 457anti-parallel
Strand 3
D
465 470anti-parallel
Strand 4
D
358 361parallel
Strand 5
D
393 396anti-parallel
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There are 7 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
259 261first strand
Strand 2
D
441 457anti-parallel
Strand 3
D
283 312anti-parallel
Strand 4
D
329 334anti-parallel
Strand 5
D
413 420anti-parallel
Strand 6
D
381 385anti-parallel
Strand 7
D
374 378anti-parallel
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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
259 261first strand
Strand 2
D
441 457anti-parallel
Strand 3
D
283 312anti-parallel
Strand 4
D
271 274anti-parallel
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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
315 323first strand
Strand 2
D
283 312anti-parallel
Strand 3
D
271 274anti-parallel
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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
5 8first strand
Strand 2
H
20 23anti-parallel
Strand 3
H
73 75anti-parallel
Strand 4
H
66 68anti-parallel
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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
55 57first strand
Strand 2
H
43 49anti-parallel
Strand 3
H
33 38anti-parallel
Strand 4
H
88 94anti-parallel
Strand 5
H
105 108anti-parallel
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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
4 6first strand
Strand 2
L
19 25anti-parallel
Strand 3
L
70 75anti-parallel
Strand 4
L
62 67anti-parallel
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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
10 13first strand
Strand 2
L
103 106parallel
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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
53 54first strand
Strand 2
L
45 49anti-parallel
Strand 3
L
33 39anti-parallel
Strand 4
L
85 90anti-parallel
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