Analysis of interatomic Contacts of Structural Units in PDB entry:
7L8N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7L8N entry

There are 2 chains in PDB entry 7L8N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 114ILE 264
B
 GLN 115ILE 264
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 7L8N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
117 137Right-handed alpha
Helix 2
AA2
A
150 155Right-handed alpha
Helix 3
AA3
A
165 174Right-handed alpha
Helix 4
AA4
A
211 224Right-handed alpha
Helix 5
AA5
A
251 264Right-handed alpha
Helix 6
AA6
B
116 134Right-handed alpha
Helix 7
AA7
B
135 137Right-handed 310
Helix 8
AA8
B
150 155Right-handed alpha
Helix 9
AA9
B
165 174Right-handed alpha
Helix 10
AB1
B
211 224Right-handed alpha
Helix 11
AB2
B
251 264Right-handed alpha
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There are 2 sheets in PDB entry 7L8N. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 163first strand
Strand 2
A
190 196anti-parallel
Strand 3
A
183 187anti-parallel
Strand 4
A
140 144parallel
Strand 5
A
227 231anti-parallel
Strand 6
A
238 242anti-parallel
Strand 7
A
245 250anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
158 163first strand
Strand 2
B
190 196anti-parallel
Strand 3
B
183 187anti-parallel
Strand 4
B
140 144parallel
Strand 5
B
227 231anti-parallel
Strand 6
B
238 242anti-parallel
Strand 7
B
245 250anti-parallel
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