Analysis of interatomic Contacts of Structural Units in PDB entry:
7L9R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7L9R entry

There are 2 chains in PDB entry 7L9R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 5ILE 331
B
 ILE 5ILE 331
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 7L9R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 13Right-handed 310
Helix 2
AA2
A
15 27Right-handed alpha
Helix 3
AA3
A
29 46Right-handed alpha
Helix 4
AA4
A
49 55Right-handed alpha
Helix 5
AA5
A
73 79Right-handed alpha
Helix 6
AA6
A
80 91Right-handed alpha
Helix 7
AA7
A
102 113Right-handed alpha
Helix 8
AA8
A
138 160Right-handed alpha
Helix 9
AA9
A
167 180Right-handed alpha
Helix 10
AB1
A
184 192Right-handed alpha
Helix 11
AB2
A
200 203Right-handed 310
Helix 12
AB3
A
204 217Right-handed alpha
Helix 13
AB4
A
225 238Right-handed alpha
Helix 14
AB5
A
308 320Right-handed alpha
Helix 15
AB6
B
9 13Right-handed 310
Helix 16
AB7
B
15 27Right-handed alpha
Helix 17
AB8
B
29 46Right-handed alpha
Helix 18
AB9
B
49 56Right-handed alpha
Helix 19
AC1
B
73 79Right-handed alpha
Helix 20
AC2
B
80 91Right-handed alpha
Helix 21
AC3
B
102 110Right-handed alpha
Helix 22
AC4
B
138 159Right-handed alpha
Helix 23
AC5
B
167 180Right-handed alpha
Helix 24
AC6
B
184 192Right-handed alpha
Helix 25
AC7
B
200 203Right-handed 310
Helix 26
AC8
B
204 217Right-handed alpha
Helix 27
AC9
B
225 238Right-handed alpha
Helix 28
AD1
B
308 319Right-handed alpha
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There are 3 sheets in PDB entry 7L9R. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
195 197first strand
Strand 2
A
96 98parallel
Strand 3
A
66 72parallel
Strand 4
A
241 247parallel
Strand 5
A
268 273parallel
Strand 6
A
301 306parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
195 197first strand
Strand 2
B
96 99parallel
Strand 3
B
66 72parallel
Strand 4
B
241 247parallel
Strand 5
B
268 273parallel
Strand 6
B
301 306parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
256 257first strand
Strand 2
B
263 264anti-parallel
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