Analysis of interatomic Contacts of Structural Units in PDB entry:
7L9X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7L9X entry

There is 1 chain in PDB entry 7L9X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 126GLY 444
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 7L9X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
132 136Right-handed 310
Helix 2
AA2
A
139 150Right-handed alpha
Helix 3
AA3
A
150 156Right-handed alpha
Helix 4
AA4
A
179 192Right-handed alpha
Helix 5
AA5
A
213 226Right-handed alpha
Helix 6
AA6
A
235 239Right-handed 310
Helix 7
AA7
A
250 255Right-handed alpha
Helix 8
AA8
A
256 263Right-handed alpha
Helix 9
AA9
A
285 290Right-handed alpha
Helix 10
AB1
A
302 313Right-handed alpha
Helix 11
AB2
A
322 333Right-handed alpha
Helix 12
AB3
A
337 350Right-handed alpha
Helix 13
AB4
A
350 359Right-handed alpha
Helix 14
AB5
A
395 399Right-handed 310
Helix 15
AB6
A
400 404Right-handed 310
Helix 16
AB7
A
410 419Right-handed alpha
Helix 17
AB8
A
426 440Right-handed alpha
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There are 2 sheets in PDB entry 7L9X. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
196 199first strand
Strand 2
A
229 233parallel
Strand 3
A
272 278parallel
Strand 4
A
169 173parallel
Strand 5
A
294 297parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
376 383first strand
Strand 2
A
361 368anti-parallel
Strand 3
A
392 393anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il