Analysis of interatomic Contacts of Structural Units in PDB entry:
7LC6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7LC6 entry

There are 4 chains in PDB entry 7LC6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 557
B
 PRO 11VAL 682
C
 LEU 4LEU 188
D
 SER 2GLU 27
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 7LC6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 31Right-handed alpha
Helix 2
AA2
A
41 51Right-handed alpha
Helix 3
AA3
A
58 83Right-handed alpha
Helix 4
AA4
A
98 111Right-handed alpha
Helix 5
AA5
A
127 157Right-handed alpha
Helix 6
AA6
A
165 176Right-handed alpha
Helix 7
AA7
A
177 193Right-handed alpha
Helix 8
AA8
A
219 229Right-handed alpha
Helix 9
AA9
A
248 274Right-handed alpha
Helix 10
AB1
A
276 305Right-handed alpha
Helix 11
AB2
A
307 313Right-handed alpha
Helix 12
AB3
A
328 342Right-handed alpha
Helix 13
AB4
A
350 354Right-handed 310
Helix 14
AB5
A
355 368Right-handed alpha
Helix 15
AB6
A
377 399Right-handed alpha
Helix 16
AB7
A
410 437Right-handed alpha
Helix 17
AB8
A
438 444Right-handed alpha
Helix 18
AB9
A
449 465Right-handed alpha
Helix 19
AC1
A
478 510Right-handed alpha
Helix 20
AC2
A
524 550Right-handed alpha
Helix 21
AC3
A
550 557Right-handed alpha
Helix 22
AC4
B
12 24Right-handed alpha
Helix 23
AC5
B
26 31Right-handed alpha
Helix 24
AC6
B
33 55Right-handed alpha
Helix 25
AC7
B
61 99Right-handed alpha
Helix 26
AC8
B
122 126Right-handed 310
Helix 27
AC9
B
155 160Right-handed alpha
Helix 28
AD1
B
198 210Right-handed alpha
Helix 29
AD2
B
215 247Right-handed alpha
Helix 30
AD3
B
251 263Right-handed alpha
Helix 31
AD4
B
265 284Right-handed alpha
Helix 32
AD5
B
291 299Right-handed alpha
Helix 33
AD6
B
329 341Right-handed alpha
Helix 34
AD7
B
346 360Right-handed alpha
Helix 35
AD8
B
397 408Right-handed alpha
Helix 36
AD9
B
414 426Right-handed alpha
Helix 37
AE1
B
452 463Right-handed alpha
Helix 38
AE2
B
474 486Right-handed alpha
Helix 39
AE3
B
495 508Right-handed alpha
Helix 40
AE4
B
522 529Right-handed alpha
Helix 41
AE5
B
539 544Right-handed alpha
Helix 42
AE6
B
555 595Right-handed alpha
Helix 43
AE7
B
599 605Right-handed alpha
Helix 44
AE8
B
612 638Right-handed alpha
Helix 45
AE9
B
645 680Right-handed alpha
Helix 46
AF1
C
5 20Right-handed alpha
Helix 47
AF2
C
20 34Right-handed alpha
Helix 48
AF3
C
34 39Right-handed alpha
Helix 49
AF4
C
91 109Right-handed alpha
Helix 50
AF5
C
117 122Right-handed alpha
Helix 51
AF6
C
133 140Right-handed alpha
Helix 52
AF7
C
140 149Right-handed alpha
Helix 53
AF8
C
151 162Right-handed alpha
Helix 54
AF9
C
178 188Right-handed alpha
Helix 55
AG1
D
3 25Right-handed alpha
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There are 8 sheets in PDB entry 7LC6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
204 205first strand
Strand 2
A
211 212anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
403 404first strand
Strand 2
A
407 408anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
119 121first strand
Strand 2
B
106 108anti-parallel
Strand 3
B
131 134anti-parallel
Strand 4
B
187 190anti-parallel
Strand 5
B
145 148anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
165 167first strand
Strand 2
B
151 154anti-parallel
Strand 3
B
181 182anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
466 470first strand
Strand 2
B
303 307parallel
Strand 3
B
513 516parallel
Strand 4
B
531 533parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
323 324first strand
Strand 2
B
439 446anti-parallel
Strand 3
B
428 435anti-parallel
Strand 4
B
393 396anti-parallel
Strand 5
B
383 386anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
42 45first strand
Strand 2
C
48 52anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
131 132first strand
Strand 2
C
175 177anti-parallel
Strand 3
C
163 164anti-parallel
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