Analysis of interatomic Contacts of Structural Units in PDB entry:
7LC9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7LC9 entry

There are 12 chains in PDB entry 7LC9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
F
 GLU 61ASP 98
A
 GLU 46LYS 96
H
 GLU 61ASP 98
B
 GLU 46LYS 96
I
 GLU 61ASP 98
C
 GLU 46LYS 96
J
 GLU 61ASP 98
D
 GLU 46LYS 96
K
 GLU 61ASP 98
E
 GLU 46LYS 96
L
 GLY 67VAL 95
G
 GLU 46LYS 96
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 7LC9

There are 7 sheets in PDB entry 7LC9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
63 66first strand
Strand 2
H
63 66parallel
Strand 3
I
63 66parallel
Strand 4
J
63 66parallel
Strand 5
K
63 66parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
70 85first strand
Strand 2
H
70 85parallel
Strand 3
I
70 85parallel
Strand 4
J
70 85parallel
Strand 5
K
70 85parallel
Strand 6
L
70 85parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
88 95first strand
Strand 2
H
88 95parallel
Strand 3
I
88 95parallel
Strand 4
J
88 95parallel
Strand 5
K
88 95parallel
Strand 6
L
88 95parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 65first strand
Strand 2
B
53 65parallel
Strand 3
C
53 65parallel
Strand 4
D
53 65parallel
Strand 5
E
53 65parallel
Strand 6
G
53 65parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 71first strand
Strand 2
B
70 74parallel
Strand 3
C
70 74parallel
Strand 4
D
70 74parallel
Strand 5
E
70 74parallel
Strand 6
G
70 74parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 82first strand
Strand 2
B
77 82parallel
Strand 3
C
77 82parallel
Strand 4
D
77 82parallel
Strand 5
E
77 82parallel
Strand 6
G
77 82parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 94first strand
Strand 2
B
86 94parallel
Strand 3
C
86 94parallel
Strand 4
D
86 94parallel
Strand 5
E
87 94parallel
Strand 6
G
87 94parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il