Analysis of interatomic Contacts of Structural Units in PDB entry:
7LCC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7LCC entry

There are 2 chains in PDB entry 7LCC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 110LEU 1495
B
 T 1 A 17
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 60 helices in PDB entry 7LCC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
133 137Right-handed 310
Helix 2
AA2
A
143 148Right-handed alpha
Helix 3
AA3
A
163 171Right-handed alpha
Helix 4
AA4
A
176 183Right-handed alpha
Helix 5
AA5
A
183 192Right-handed alpha
Helix 6
AA6
A
202 206Right-handed 310
Helix 7
AA7
A
243 245Right-handed 310
Helix 8
AA8
A
246 252Right-handed alpha
Helix 9
AA9
A
260 274Right-handed alpha
Helix 10
AB1
A
275 280Right-handed alpha
Helix 11
AB2
A
282 298Right-handed alpha
Helix 12
AB3
A
369 375Right-handed alpha
Helix 13
AB4
A
384 388Right-handed 310
Helix 14
AB5
A
413 422Right-handed alpha
Helix 15
AB6
A
435 460Right-handed alpha
Helix 16
AB7
A
469 478Right-handed alpha
Helix 17
AB8
A
500 519Right-handed alpha
Helix 18
AB9
A
533 540Right-handed alpha
Helix 19
AC1
A
549 570Right-handed alpha
Helix 20
AC2
A
602 605Right-handed 310
Helix 21
AC3
A
608 616Right-handed alpha
Helix 22
AC4
A
626 637Right-handed alpha
Helix 23
AC5
A
652 657Right-handed alpha
Helix 24
AC6
A
697 699Right-handed 310
Helix 25
AC7
A
703 710Right-handed alpha
Helix 26
AC8
A
721 729Right-handed alpha
Helix 27
AC9
A
730 733Right-handed 310
Helix 28
AD1
A
765 773Right-handed alpha
Helix 29
AD2
A
803 814Right-handed alpha
Helix 30
AD3
A
816 828Right-handed alpha
Helix 31
AD4
A
829 834Right-handed 310
Helix 32
AD5
A
835 837Right-handed 310
Helix 33
AD6
A
838 842Right-handed alpha
Helix 34
AD7
A
871 884Right-handed alpha
Helix 35
AD8
A
889 895Right-handed alpha
Helix 36
AD9
A
903 912Right-handed alpha
Helix 37
AE1
A
917 931Right-handed alpha
Helix 38
AE2
A
932 947Right-handed alpha
Helix 39
AE3
A
951 959Right-handed alpha
Helix 40
AE4
A
959 972Right-handed alpha
Helix 41
AE5
A
980 997Right-handed alpha
Helix 42
AE6
A
999 1004Right-handed 310
Helix 43
AE7
A
1018 1033Right-handed alpha
Helix 44
AE8
A
1034 1050Right-handed alpha
Helix 45
AE9
A
1065 1082Right-handed alpha
Helix 46
AF1
A
1092 1099Right-handed alpha
Helix 47
AF2
A
1104 1109Right-handed alpha
Helix 48
AF3
A
1127 1136Right-handed alpha
Helix 49
AF4
A
1148 1163Right-handed alpha
Helix 50
AF5
A
1167 1172Right-handed 310
Helix 51
AF6
A
1191 1199Right-handed alpha
Helix 52
AF7
A
1200 1209Right-handed 310
Helix 53
AF8
A
1222 1235Right-handed alpha
Helix 54
AF9
A
1259 1266Right-handed alpha
Helix 55
AG1
A
1286 1301Right-handed alpha
Helix 56
AG2
A
1320 1325Right-handed alpha
Helix 57
AG3
A
1326 1333Right-handed alpha
Helix 58
AG4
A
1427 1429Right-handed 310
Helix 59
AG5
A
1449 1457Right-handed alpha
Helix 60
AG6
A
1460 1462Right-handed 310
Back to top of page

There are 13 sheets in PDB entry 7LCC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
153 154first strand
Strand 2
A
391 392anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
210 213first strand
Strand 2
A
216 220anti-parallel
Strand 3
A
194 198parallel
Strand 4
A
344 347anti-parallel
Strand 5
A
360 363anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
237 240first strand
Strand 2
A
328 331anti-parallel
Strand 3
A
753 764anti-parallel
Strand 4
A
737 747anti-parallel
Strand 5
A
302 309anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
489 491first strand
Strand 2
A
464 468anti-parallel
Strand 3
A
796 800anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
714 718first strand
Strand 2
A
523 528anti-parallel
Strand 3
A
592 600anti-parallel
Strand 4
A
577 586anti-parallel
Strand 5
A
778 780anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
686 689first strand
Strand 2
A
692 695anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
843 846first strand
Strand 2
A
849 852anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1086 1089first strand
Strand 2
A
1138 1141parallel
Strand 3
A
1173 1175parallel
Strand 4
A
1057 1060parallel
Strand 5
A
1210 1212parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1247 1249first strand
Strand 2
A
1485 1487anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1423 1425first strand
Strand 2
A
1281 1284parallel
Strand 3
A
1437 1441parallel
Strand 4
A
1464 1468parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1306 1308first strand
Strand 2
A
1343 1345anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1311 1314first strand
Strand 2
A
1411 1415anti-parallel
Strand 3
A
1398 1400anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1392 1395first strand
Strand 2
A
1378 1383anti-parallel
Strand 3
A
1369 1375anti-parallel
Strand 4
A
1350 1353anti-parallel
Strand 5
A
1418 1420anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il