Analysis of interatomic Contacts of Structural Units in PDB entry:
7LCJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7LCJ entry

There is 1 chain in PDB entry 7LCJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
R
 ALA 28GLU 423
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 7LCJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
R
31 53Right-handed alpha
Helix 2
AA2
R
136 169Right-handed alpha
Helix 3
AA3
R
175 201Right-handed alpha
Helix 4
AA4
R
202 207Right-handed alpha
Helix 5
AA5
R
210 222Right-handed alpha
Helix 6
AA6
R
224 257Right-handed alpha
Helix 7
AA7
R
263 276Right-handed alpha
Helix 8
AA8
R
277 291Right-handed alpha
Helix 9
AA9
R
306 338Right-handed alpha
Helix 10
AB1
R
343 361Right-handed alpha
Helix 11
AB2
R
363 371Right-handed alpha
Helix 12
AB3
R
377 392Right-handed alpha
Helix 13
AB4
R
393 404Right-handed alpha
Helix 14
AB5
R
406 423Right-handed alpha
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There are 2 sheets in PDB entry 7LCJ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
R
79 80first strand
Strand 2
R
99 104anti-parallel
Strand 3
R
83 84anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
R
79 80first strand
Strand 2
R
99 104anti-parallel
Strand 3
R
121 122anti-parallel
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