Analysis of interatomic Contacts of Structural Units in PDB entry:
7LCK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7LCK entry

There is 1 chain in PDB entry 7LCK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
R
 ALA 28GLU 423
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 7LCK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
R
31 53Right-handed alpha
Helix 2
AA2
R
136 169Right-handed alpha
Helix 3
AA3
R
175 201Right-handed alpha
Helix 4
AA4
R
210 212Right-handed 310
Helix 5
AA5
R
213 222Right-handed alpha
Helix 6
AA6
R
224 256Right-handed alpha
Helix 7
AA7
R
261 276Right-handed alpha
Helix 8
AA8
R
277 279Right-handed 310
Helix 9
AA9
R
280 292Right-handed alpha
Helix 10
AB1
R
306 337Right-handed alpha
Helix 11
AB2
R
341 361Right-handed alpha
Helix 12
AB3
R
363 370Right-handed alpha
Helix 13
AB4
R
377 391Right-handed alpha
Helix 14
AB5
R
393 402Right-handed alpha
Helix 15
AB6
R
406 421Right-handed alpha
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There are 3 sheets in PDB entry 7LCK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
R
65 66first strand
Strand 2
R
71 72anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
R
80 84first strand
Strand 2
R
99 105anti-parallel
Strand 3
R
109 110anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
R
80 84first strand
Strand 2
R
99 105anti-parallel
Strand 3
R
121 122anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il