Analysis of interatomic Contacts of Structural Units in PDB entry:
7LD0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7LD0 entry

There are 8 chains in PDB entry 7LD0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 61	LEU 699
B	VAL 61	LEU 699
C	VAL 61	LEU 699
D	VAL 61	LEU 699
E	VAL 61	LEU 699
F	VAL 61	LEU 699
G	VAL 61	LEU 699
H	VAL 61	LEU 699

There are336 helices in PDB entry 7LD0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	61	68	Right-handed alpha
Helix 2	AA2	A	71	79	Right-handed alpha
Helix 3	AA3	A	84	104	Right-handed alpha
Helix 4	AA4	A	108	124	Right-handed alpha
Helix 5	AA5	A	124	133	Right-handed alpha
Helix 6	AA6	A	141	151	Right-handed alpha
Helix 7	AA7	A	153	164	Right-handed alpha
Helix 8	AA8	A	164	172	Right-handed alpha
Helix 9	AA9	A	177	193	Right-handed alpha
Helix 10	AB1	A	195	206	Right-handed alpha
Helix 11	AB2	A	206	214	Right-handed alpha
Helix 12	AB3	A	215	217	Right-handed 310
Helix 13	AB4	A	219	237	Right-handed alpha
Helix 14	AB5	A	238	248	Right-handed alpha
Helix 15	AB6	A	251	253	Right-handed 310
Helix 16	AB7	A	254	259	Right-handed alpha
Helix 17	AB8	A	264	278	Right-handed alpha
Helix 18	AB9	A	283	289	Right-handed alpha
Helix 19	AC1	A	295	303	Right-handed alpha
Helix 20	AC2	A	304	309	Right-handed alpha
Helix 21	AC3	A	323	329	Right-handed alpha
Helix 22	AC4	A	330	335	Right-handed alpha
Helix 23	AC5	A	338	359	Right-handed alpha
Helix 24	AC6	A	363	369	Right-handed alpha
Helix 25	AC7	A	369	379	Right-handed alpha
Helix 26	AC8	A	383	397	Right-handed alpha
Helix 27	AC9	A	413	423	Right-handed alpha
Helix 28	AD1	A	430	437	Right-handed alpha
Helix 29	AD2	A	439	444	Right-handed alpha
Helix 30	AD3	A	447	454	Right-handed alpha
Helix 31	AD4	A	461	477	Right-handed alpha
Helix 32	AD5	A	486	495	Right-handed alpha
Helix 33	AD6	A	498	500	Right-handed 310
Helix 34	AD7	A	501	508	Right-handed alpha
Helix 35	AD8	A	514	518	Right-handed 310
Helix 36	AD9	A	521	526	Right-handed alpha
Helix 37	AE1	A	531	543	Right-handed alpha
Helix 38	AE2	A	573	587	Right-handed alpha
Helix 39	AE3	A	606	614	Right-handed alpha
Helix 40	AE4	A	625	629	Right-handed 310
Helix 41	AE5	A	638	650	Right-handed alpha
Helix 42	AE6	A	690	699	Right-handed alpha
Helix 43	AE7	B	62	68	Right-handed alpha
Helix 44	AE8	B	71	79	Right-handed alpha
Helix 45	AE9	B	84	104	Right-handed alpha
Helix 46	AF1	B	108	124	Right-handed alpha
Helix 47	AF2	B	124	133	Right-handed alpha
Helix 48	AF3	B	141	151	Right-handed alpha
Helix 49	AF4	B	153	164	Right-handed alpha
Helix 50	AF5	B	164	172	Right-handed alpha
Helix 51	AF6	B	177	193	Right-handed alpha
Helix 52	AF7	B	195	206	Right-handed alpha
Helix 53	AF8	B	206	214	Right-handed alpha
Helix 54	AF9	B	215	217	Right-handed 310
Helix 55	AG1	B	219	237	Right-handed alpha
Helix 56	AG2	B	238	248	Right-handed alpha
Helix 57	AG3	B	251	253	Right-handed 310
Helix 58	AG4	B	254	259	Right-handed alpha
Helix 59	AG5	B	264	278	Right-handed alpha
Helix 60	AG6	B	283	289	Right-handed alpha
Helix 61	AG7	B	295	303	Right-handed alpha
Helix 62	AG8	B	304	309	Right-handed alpha
Helix 63	AG9	B	323	329	Right-handed alpha
Helix 64	AH1	B	330	335	Right-handed alpha
Helix 65	AH2	B	338	359	Right-handed alpha
Helix 66	AH3	B	363	369	Right-handed alpha
Helix 67	AH4	B	369	379	Right-handed alpha
Helix 68	AH5	B	383	397	Right-handed alpha
Helix 69	AH6	B	413	423	Right-handed alpha
Helix 70	AH7	B	430	437	Right-handed alpha
Helix 71	AH8	B	439	444	Right-handed alpha
Helix 72	AH9	B	447	454	Right-handed alpha
Helix 73	AI1	B	461	477	Right-handed alpha
Helix 74	AI2	B	486	495	Right-handed alpha
Helix 75	AI3	B	498	500	Right-handed 310
Helix 76	AI4	B	501	508	Right-handed alpha
Helix 77	AI5	B	514	518	Right-handed 310
Helix 78	AI6	B	521	526	Right-handed alpha
Helix 79	AI7	B	531	543	Right-handed alpha
Helix 80	AI8	B	573	587	Right-handed alpha
Helix 81	AI9	B	606	614	Right-handed alpha
Helix 82	AJ1	B	625	629	Right-handed 310
Helix 83	AJ2	B	638	650	Right-handed alpha
Helix 84	AJ3	B	690	699	Right-handed alpha
Helix 85	AJ4	C	62	68	Right-handed alpha
Helix 86	AJ5	C	71	79	Right-handed alpha
Helix 87	AJ6	C	84	104	Right-handed alpha
Helix 88	AJ7	C	108	124	Right-handed alpha
Helix 89	AJ8	C	124	133	Right-handed alpha
Helix 90	AJ9	C	141	151	Right-handed alpha
Helix 91	AK1	C	153	164	Right-handed alpha
Helix 92	AK2	C	164	172	Right-handed alpha
Helix 93	AK3	C	177	193	Right-handed alpha
Helix 94	AK4	C	195	206	Right-handed alpha
Helix 95	AK5	C	206	214	Right-handed alpha
Helix 96	AK6	C	215	217	Right-handed 310
Helix 97	AK7	C	219	237	Right-handed alpha
Helix 98	AK8	C	238	248	Right-handed alpha
Helix 99	AK9	C	251	253	Right-handed 310
Helix 100	AL1	C	254	259	Right-handed alpha
Helix 101	AL2	C	264	278	Right-handed alpha
Helix 102	AL3	C	283	289	Right-handed alpha
Helix 103	AL4	C	295	303	Right-handed alpha
Helix 104	AL5	C	304	309	Right-handed alpha
Helix 105	AL6	C	323	329	Right-handed alpha
Helix 106	AL7	C	330	335	Right-handed alpha
Helix 107	AL8	C	338	359	Right-handed alpha
Helix 108	AL9	C	363	369	Right-handed alpha
Helix 109	AM1	C	369	379	Right-handed alpha
Helix 110	AM2	C	383	397	Right-handed alpha
Helix 111	AM3	C	413	423	Right-handed alpha
Helix 112	AM4	C	430	437	Right-handed alpha
Helix 113	AM5	C	439	444	Right-handed alpha
Helix 114	AM6	C	447	454	Right-handed alpha
Helix 115	AM7	C	461	477	Right-handed alpha
Helix 116	AM8	C	486	495	Right-handed alpha
Helix 117	AM9	C	498	500	Right-handed 310
Helix 118	AN1	C	501	508	Right-handed alpha
Helix 119	AN2	C	514	518	Right-handed 310
Helix 120	AN3	C	521	526	Right-handed alpha
Helix 121	AN4	C	531	543	Right-handed alpha
Helix 122	AN5	C	573	587	Right-handed alpha
Helix 123	AN6	C	606	614	Right-handed alpha
Helix 124	AN7	C	625	629	Right-handed 310
Helix 125	AN8	C	638	650	Right-handed alpha
Helix 126	AN9	C	690	699	Right-handed alpha
Helix 127	AO1	D	62	68	Right-handed alpha
Helix 128	AO2	D	71	79	Right-handed alpha
Helix 129	AO3	D	84	104	Right-handed alpha
Helix 130	AO4	D	108	124	Right-handed alpha
Helix 131	AO5	D	124	133	Right-handed alpha
Helix 132	AO6	D	141	151	Right-handed alpha
Helix 133	AO7	D	153	164	Right-handed alpha
Helix 134	AO8	D	164	172	Right-handed alpha
Helix 135	AO9	D	177	193	Right-handed alpha
Helix 136	AP1	D	195	206	Right-handed alpha
Helix 137	AP2	D	206	214	Right-handed alpha
Helix 138	AP3	D	215	217	Right-handed 310
Helix 139	AP4	D	219	237	Right-handed alpha
Helix 140	AP5	D	238	248	Right-handed alpha
Helix 141	AP6	D	251	253	Right-handed 310
Helix 142	AP7	D	254	259	Right-handed alpha
Helix 143	AP8	D	264	278	Right-handed alpha
Helix 144	AP9	D	283	289	Right-handed alpha
Helix 145	AQ1	D	295	303	Right-handed alpha
Helix 146	AQ2	D	304	309	Right-handed alpha
Helix 147	AQ3	D	323	329	Right-handed alpha
Helix 148	AQ4	D	330	335	Right-handed alpha
Helix 149	AQ5	D	338	359	Right-handed alpha
Helix 150	AQ6	D	363	369	Right-handed alpha
Helix 151	AQ7	D	369	379	Right-handed alpha
Helix 152	AQ8	D	383	397	Right-handed alpha
Helix 153	AQ9	D	413	423	Right-handed alpha
Helix 154	AR1	D	430	437	Right-handed alpha
Helix 155	AR2	D	439	444	Right-handed alpha
Helix 156	AR3	D	447	454	Right-handed alpha
Helix 157	AR4	D	461	477	Right-handed alpha
Helix 158	AR5	D	486	495	Right-handed alpha
Helix 159	AR6	D	498	500	Right-handed 310
Helix 160	AR7	D	501	508	Right-handed alpha
Helix 161	AR8	D	514	518	Right-handed 310
Helix 162	AR9	D	521	526	Right-handed alpha
Helix 163	AS1	D	531	543	Right-handed alpha
Helix 164	AS2	D	573	587	Right-handed alpha
Helix 165	AS3	D	606	614	Right-handed alpha
Helix 166	AS4	D	625	629	Right-handed 310
Helix 167	AS5	D	638	650	Right-handed alpha
Helix 168	AS6	D	690	699	Right-handed alpha
Helix 169	AS7	E	62	68	Right-handed alpha
Helix 170	AS8	E	71	79	Right-handed alpha
Helix 171	AS9	E	84	104	Right-handed alpha
Helix 172	AT1	E	108	124	Right-handed alpha
Helix 173	AT2	E	124	133	Right-handed alpha
Helix 174	AT3	E	141	151	Right-handed alpha
Helix 175	AT4	E	153	164	Right-handed alpha
Helix 176	AT5	E	164	172	Right-handed alpha
Helix 177	AT6	E	177	193	Right-handed alpha
Helix 178	AT7	E	195	206	Right-handed alpha
Helix 179	AT8	E	206	214	Right-handed alpha
Helix 180	AT9	E	215	217	Right-handed 310
Helix 181	AU1	E	219	237	Right-handed alpha
Helix 182	AU2	E	238	248	Right-handed alpha
Helix 183	AU3	E	251	253	Right-handed 310
Helix 184	AU4	E	254	259	Right-handed alpha
Helix 185	AU5	E	264	278	Right-handed alpha
Helix 186	AU6	E	283	289	Right-handed alpha
Helix 187	AU7	E	295	303	Right-handed alpha
Helix 188	AU8	E	304	309	Right-handed alpha
Helix 189	AU9	E	323	329	Right-handed alpha
Helix 190	AV1	E	330	335	Right-handed alpha
Helix 191	AV2	E	338	359	Right-handed alpha
Helix 192	AV3	E	363	369	Right-handed alpha
Helix 193	AV4	E	369	379	Right-handed alpha
Helix 194	AV5	E	383	397	Right-handed alpha
Helix 195	AV6	E	413	423	Right-handed alpha
Helix 196	AV7	E	430	437	Right-handed alpha
Helix 197	AV8	E	439	444	Right-handed alpha
Helix 198	AV9	E	447	454	Right-handed alpha
Helix 199	AW1	E	461	477	Right-handed alpha
Helix 200	AW2	E	486	495	Right-handed alpha
Helix 201	AW3	E	498	500	Right-handed 310
Helix 202	AW4	E	501	508	Right-handed alpha
Helix 203	AW5	E	514	518	Right-handed 310
Helix 204	AW6	E	521	526	Right-handed alpha
Helix 205	AW7	E	531	543	Right-handed alpha
Helix 206	AW8	E	573	587	Right-handed alpha
Helix 207	AW9	E	606	614	Right-handed alpha
Helix 208	AX1	E	625	629	Right-handed 310
Helix 209	AX2	E	638	650	Right-handed alpha
Helix 210	AX3	E	690	699	Right-handed alpha
Helix 211	AX4	F	62	68	Right-handed alpha
Helix 212	AX5	F	71	79	Right-handed alpha
Helix 213	AX6	F	84	104	Right-handed alpha
Helix 214	AX7	F	108	124	Right-handed alpha
Helix 215	AX8	F	124	133	Right-handed alpha
Helix 216	AX9	F	141	151	Right-handed alpha
Helix 217	AY1	F	153	164	Right-handed alpha
Helix 218	AY2	F	164	172	Right-handed alpha
Helix 219	AY3	F	177	193	Right-handed alpha
Helix 220	AY4	F	195	206	Right-handed alpha
Helix 221	AY5	F	206	214	Right-handed alpha
Helix 222	AY6	F	215	217	Right-handed 310
Helix 223	AY7	F	219	237	Right-handed alpha
Helix 224	AY8	F	238	248	Right-handed alpha
Helix 225	AY9	F	251	253	Right-handed 310
Helix 226	AZ1	F	254	259	Right-handed alpha
Helix 227	AZ2	F	264	278	Right-handed alpha
Helix 228	AZ3	F	283	289	Right-handed alpha
Helix 229	AZ4	F	295	303	Right-handed alpha
Helix 230	AZ5	F	304	309	Right-handed alpha
Helix 231	AZ6	F	323	329	Right-handed alpha
Helix 232	AZ7	F	330	335	Right-handed alpha
Helix 233	AZ8	F	338	359	Right-handed alpha
Helix 234	AZ9	F	363	369	Right-handed alpha
Helix 235	BA1	F	369	379	Right-handed alpha
Helix 236	BA2	F	383	397	Right-handed alpha
Helix 237	BA3	F	413	423	Right-handed alpha
Helix 238	BA4	F	430	437	Right-handed alpha
Helix 239	BA5	F	439	444	Right-handed alpha
Helix 240	BA6	F	447	454	Right-handed alpha
Helix 241	BA7	F	461	477	Right-handed alpha
Helix 242	BA8	F	486	495	Right-handed alpha
Helix 243	BA9	F	498	500	Right-handed 310
Helix 244	BB1	F	501	508	Right-handed alpha
Helix 245	BB2	F	514	518	Right-handed 310
Helix 246	BB3	F	521	526	Right-handed alpha
Helix 247	BB4	F	531	543	Right-handed alpha
Helix 248	BB5	F	573	587	Right-handed alpha
Helix 249	BB6	F	606	614	Right-handed alpha
Helix 250	BB7	F	625	629	Right-handed 310
Helix 251	BB8	F	638	650	Right-handed alpha
Helix 252	BB9	F	690	699	Right-handed alpha
Helix 253	BC1	G	62	68	Right-handed alpha
Helix 254	BC2	G	71	79	Right-handed alpha
Helix 255	BC3	G	84	104	Right-handed alpha
Helix 256	BC4	G	108	124	Right-handed alpha
Helix 257	BC5	G	124	133	Right-handed alpha
Helix 258	BC6	G	141	151	Right-handed alpha
Helix 259	BC7	G	153	164	Right-handed alpha
Helix 260	BC8	G	164	172	Right-handed alpha
Helix 261	BC9	G	177	193	Right-handed alpha
Helix 262	BD1	G	195	206	Right-handed alpha
Helix 263	BD2	G	206	214	Right-handed alpha
Helix 264	BD3	G	215	217	Right-handed 310
Helix 265	BD4	G	219	237	Right-handed alpha
Helix 266	BD5	G	238	248	Right-handed alpha
Helix 267	BD6	G	251	253	Right-handed 310
Helix 268	BD7	G	254	259	Right-handed alpha
Helix 269	BD8	G	264	278	Right-handed alpha
Helix 270	BD9	G	283	289	Right-handed alpha
Helix 271	BE1	G	295	303	Right-handed alpha
Helix 272	BE2	G	304	309	Right-handed alpha
Helix 273	BE3	G	323	329	Right-handed alpha
Helix 274	BE4	G	330	335	Right-handed alpha
Helix 275	BE5	G	338	359	Right-handed alpha
Helix 276	BE6	G	363	369	Right-handed alpha
Helix 277	BE7	G	369	379	Right-handed alpha
Helix 278	BE8	G	383	397	Right-handed alpha
Helix 279	BE9	G	413	423	Right-handed alpha
Helix 280	BF1	G	430	437	Right-handed alpha
Helix 281	BF2	G	439	444	Right-handed alpha
Helix 282	BF3	G	447	454	Right-handed alpha
Helix 283	BF4	G	461	477	Right-handed alpha
Helix 284	BF5	G	486	495	Right-handed alpha
Helix 285	BF6	G	498	500	Right-handed 310
Helix 286	BF7	G	501	508	Right-handed alpha
Helix 287	BF8	G	514	518	Right-handed 310
Helix 288	BF9	G	521	526	Right-handed alpha
Helix 289	BG1	G	531	543	Right-handed alpha
Helix 290	BG2	G	573	587	Right-handed alpha
Helix 291	BG3	G	606	614	Right-handed alpha
Helix 292	BG4	G	625	629	Right-handed 310
Helix 293	BG5	G	638	650	Right-handed alpha
Helix 294	BG6	G	690	699	Right-handed alpha
Helix 295	BG7	H	62	68	Right-handed alpha
Helix 296	BG8	H	71	79	Right-handed alpha
Helix 297	BG9	H	84	104	Right-handed alpha
Helix 298	BH1	H	108	124	Right-handed alpha
Helix 299	BH2	H	124	133	Right-handed alpha
Helix 300	BH3	H	141	151	Right-handed alpha
Helix 301	BH4	H	153	164	Right-handed alpha
Helix 302	BH5	H	164	172	Right-handed alpha
Helix 303	BH6	H	177	193	Right-handed alpha
Helix 304	BH7	H	195	206	Right-handed alpha
Helix 305	BH8	H	206	214	Right-handed alpha
Helix 306	BH9	H	215	217	Right-handed 310
Helix 307	BI1	H	219	237	Right-handed alpha
Helix 308	BI2	H	238	248	Right-handed alpha
Helix 309	BI3	H	251	253	Right-handed 310
Helix 310	BI4	H	254	259	Right-handed alpha
Helix 311	BI5	H	264	278	Right-handed alpha
Helix 312	BI6	H	283	289	Right-handed alpha
Helix 313	BI7	H	295	303	Right-handed alpha
Helix 314	BI8	H	304	309	Right-handed alpha
Helix 315	BI9	H	323	329	Right-handed alpha
Helix 316	BJ1	H	330	335	Right-handed alpha
Helix 317	BJ2	H	338	359	Right-handed alpha
Helix 318	BJ3	H	363	369	Right-handed alpha
Helix 319	BJ4	H	369	379	Right-handed alpha
Helix 320	BJ5	H	383	397	Right-handed alpha
Helix 321	BJ6	H	413	423	Right-handed alpha
Helix 322	BJ7	H	430	437	Right-handed alpha
Helix 323	BJ8	H	439	444	Right-handed alpha
Helix 324	BJ9	H	447	454	Right-handed alpha
Helix 325	BK1	H	461	477	Right-handed alpha
Helix 326	BK2	H	486	495	Right-handed alpha
Helix 327	BK3	H	498	500	Right-handed 310
Helix 328	BK4	H	501	508	Right-handed alpha
Helix 329	BK5	H	514	518	Right-handed 310
Helix 330	BK6	H	521	526	Right-handed alpha
Helix 331	BK7	H	531	543	Right-handed alpha
Helix 332	BK8	H	573	587	Right-handed alpha
Helix 333	BK9	H	606	614	Right-handed alpha
Helix 334	BL1	H	625	629	Right-handed 310
Helix 335	BL2	H	638	650	Right-handed alpha
Helix 336	BL3	H	690	699	Right-handed alpha

There are 8 sheets in PDB entry 7LD0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	566	567	first strand
Strand 2	A	617	621	parallel
Strand 3	A	653	657	parallel
Strand 4	A	681	682	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	566	567	first strand
Strand 2	B	617	621	parallel
Strand 3	B	653	657	parallel
Strand 4	B	681	682	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	566	567	first strand
Strand 2	C	617	621	parallel
Strand 3	C	653	657	parallel
Strand 4	C	681	682	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	566	567	first strand
Strand 2	D	617	621	parallel
Strand 3	D	653	657	parallel
Strand 4	D	681	682	parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	566	567	first strand
Strand 2	E	617	621	parallel
Strand 3	E	653	657	parallel
Strand 4	E	681	682	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	566	567	first strand
Strand 2	F	617	621	parallel
Strand 3	F	653	657	parallel
Strand 4	F	681	682	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	566	567	first strand
Strand 2	G	617	621	parallel
Strand 3	G	653	657	parallel
Strand 4	G	681	682	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	566	567	first strand
Strand 2	H	617	621	parallel
Strand 3	H	653	657	parallel
Strand 4	H	681	682	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7LD0

Analysis of interatomic Contacts of Structural Units in PDB entry:
7LD0