Analysis of interatomic Contacts of Structural Units in PDB entry:
7LFF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7LFF entry

There are 2 chains in PDB entry 7LFF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 25ASN 436
B
 SER 25ASN 436
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 7LFF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
36 42Right-handed alpha
Helix 2
AA2
A
122 130Right-handed alpha
Helix 3
AA3
A
157 164Right-handed alpha
Helix 4
AA4
A
166 168Right-handed 310
Helix 5
AA5
A
169 175Right-handed alpha
Helix 6
AA6
A
190 196Right-handed alpha
Helix 7
AA7
A
203 219Right-handed alpha
Helix 8
AA8
A
248 252Right-handed 310
Helix 9
AA9
A
274 288Right-handed alpha
Helix 10
AB1
A
357 372Right-handed alpha
Helix 11
AB2
A
380 383Right-handed 310
Helix 12
AB3
A
384 390Right-handed alpha
Helix 13
AB4
A
409 411Right-handed 310
Helix 14
AB5
A
412 425Right-handed alpha
Helix 15
AB6
B
36 41Right-handed alpha
Helix 16
AB7
B
122 130Right-handed alpha
Helix 17
AB8
B
157 166Right-handed alpha
Helix 18
AB9
B
169 175Right-handed alpha
Helix 19
AC1
B
190 196Right-handed alpha
Helix 20
AC2
B
203 220Right-handed alpha
Helix 21
AC3
B
248 252Right-handed 310
Helix 22
AC4
B
274 288Right-handed alpha
Helix 23
AC5
B
357 372Right-handed alpha
Helix 24
AC6
B
380 383Right-handed 310
Helix 25
AC7
B
384 390Right-handed alpha
Helix 26
AC8
B
409 411Right-handed 310
Helix 27
AC9
B
412 425Right-handed alpha
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There are 6 sheets in PDB entry 7LFF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 152first strand
Strand 2
A
26 32parallel
Strand 3
A
399 406parallel
Strand 4
A
179 185parallel
Strand 5
A
325 333parallel
Strand 6
A
304 315anti-parallel
Strand 7
A
223 235anti-parallel
Strand 8
A
238 241anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 108first strand
Strand 2
A
113 116anti-parallel
Strand 3
A
144 147anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
254 256first strand
Strand 2
A
262 264anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
150 152first strand
Strand 2
B
26 32parallel
Strand 3
B
399 406parallel
Strand 4
B
179 185parallel
Strand 5
B
325 333parallel
Strand 6
B
304 315anti-parallel
Strand 7
B
223 235anti-parallel
Strand 8
B
238 241anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
106 108first strand
Strand 2
B
113 116anti-parallel
Strand 3
B
144 147anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
254 256first strand
Strand 2
B
262 264anti-parallel
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