Analysis of interatomic Contacts of Structural Units in PDB entry:
7LFW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7LFW entry

There are 4 chains in PDB entry 7LFW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 156	LYS 605
B	VAL 156	LYS 605
C	VAL 156	LYS 605
D	VAL 156	LYS 605

There are 76 helices in PDB entry 7LFW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	162	189	Right-handed alpha
Helix 2	AA2	A	189	196	Right-handed alpha
Helix 3	AA3	A	196	220	Right-handed alpha
Helix 4	AA4	A	232	242	Right-handed alpha
Helix 5	AA5	A	243	253	Right-handed alpha
Helix 6	AA6	A	255	258	Right-handed 310
Helix 7	AA7	A	259	264	Right-handed alpha
Helix 8	AA8	A	267	276	Right-handed 310
Helix 9	AA9	A	277	292	Right-handed alpha
Helix 10	AB1	A	294	326	Right-handed alpha
Helix 11	AB2	A	344	361	Right-handed alpha
Helix 12	AB3	A	371	424	Right-handed alpha
Helix 13	AB4	A	427	444	Right-handed alpha
Helix 14	AB5	A	449	455	Right-handed alpha
Helix 15	AB6	A	458	471	Right-handed alpha
Helix 16	AB7	A	486	493	Right-handed alpha
Helix 17	AB8	A	546	550	Right-handed 310
Helix 18	AB9	A	578	586	Right-handed alpha
Helix 19	AC1	A	591	605	Right-handed alpha
Helix 20	AC2	B	162	189	Right-handed alpha
Helix 21	AC3	B	189	196	Right-handed alpha
Helix 22	AC4	B	196	220	Right-handed alpha
Helix 23	AC5	B	232	242	Right-handed alpha
Helix 24	AC6	B	243	253	Right-handed alpha
Helix 25	AC7	B	255	258	Right-handed 310
Helix 26	AC8	B	259	264	Right-handed alpha
Helix 27	AC9	B	267	276	Right-handed 310
Helix 28	AD1	B	277	292	Right-handed alpha
Helix 29	AD2	B	294	326	Right-handed alpha
Helix 30	AD3	B	344	361	Right-handed alpha
Helix 31	AD4	B	371	424	Right-handed alpha
Helix 32	AD5	B	427	444	Right-handed alpha
Helix 33	AD6	B	449	455	Right-handed alpha
Helix 34	AD7	B	458	471	Right-handed alpha
Helix 35	AD8	B	486	493	Right-handed alpha
Helix 36	AD9	B	546	550	Right-handed 310
Helix 37	AE1	B	578	586	Right-handed alpha
Helix 38	AE2	B	591	605	Right-handed alpha
Helix 39	AE3	C	162	189	Right-handed alpha
Helix 40	AE4	C	189	196	Right-handed alpha
Helix 41	AE5	C	196	220	Right-handed alpha
Helix 42	AE6	C	232	242	Right-handed alpha
Helix 43	AE7	C	243	253	Right-handed alpha
Helix 44	AE8	C	255	258	Right-handed 310
Helix 45	AE9	C	259	264	Right-handed alpha
Helix 46	AF1	C	267	276	Right-handed 310
Helix 47	AF2	C	277	292	Right-handed alpha
Helix 48	AF3	C	294	326	Right-handed alpha
Helix 49	AF4	C	344	361	Right-handed alpha
Helix 50	AF5	C	371	424	Right-handed alpha
Helix 51	AF6	C	427	444	Right-handed alpha
Helix 52	AF7	C	449	455	Right-handed alpha
Helix 53	AF8	C	458	471	Right-handed alpha
Helix 54	AF9	C	486	493	Right-handed alpha
Helix 55	AG1	C	546	550	Right-handed 310
Helix 56	AG2	C	578	586	Right-handed alpha
Helix 57	AG3	C	591	605	Right-handed alpha
Helix 58	AG4	D	162	189	Right-handed alpha
Helix 59	AG5	D	189	196	Right-handed alpha
Helix 60	AG6	D	196	220	Right-handed alpha
Helix 61	AG7	D	232	242	Right-handed alpha
Helix 62	AG8	D	243	253	Right-handed alpha
Helix 63	AG9	D	255	258	Right-handed 310
Helix 64	AH1	D	259	264	Right-handed alpha
Helix 65	AH2	D	267	276	Right-handed 310
Helix 66	AH3	D	277	292	Right-handed alpha
Helix 67	AH4	D	294	326	Right-handed alpha
Helix 68	AH5	D	344	361	Right-handed alpha
Helix 69	AH6	D	371	424	Right-handed alpha
Helix 70	AH7	D	427	444	Right-handed alpha
Helix 71	AH8	D	449	455	Right-handed alpha
Helix 72	AH9	D	458	471	Right-handed alpha
Helix 73	AI1	D	486	493	Right-handed alpha
Helix 74	AI2	D	546	550	Right-handed 310
Helix 75	AI3	D	578	586	Right-handed alpha
Helix 76	AI4	D	591	605	Right-handed alpha

There are 12 sheets in PDB entry 7LFW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	224	225	first strand
Strand 2	A	228	229	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	496	500	first strand
Strand 2	A	564	577	anti-parallel
Strand 3	A	515	527	anti-parallel
Strand 4	A	534	538	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	505	507	first strand
Strand 2	A	564	577	anti-parallel
Strand 3	A	515	527	anti-parallel
Strand 4	A	543	544	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	224	225	first strand
Strand 2	B	228	229	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	496	500	first strand
Strand 2	B	564	577	anti-parallel
Strand 3	B	515	527	anti-parallel
Strand 4	B	534	538	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	505	507	first strand
Strand 2	B	564	577	anti-parallel
Strand 3	B	515	527	anti-parallel
Strand 4	B	543	544	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	224	225	first strand
Strand 2	C	228	229	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	496	500	first strand
Strand 2	C	564	577	anti-parallel
Strand 3	C	515	527	anti-parallel
Strand 4	C	534	538	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	505	507	first strand
Strand 2	C	564	577	anti-parallel
Strand 3	C	515	527	anti-parallel
Strand 4	C	543	544	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	224	225	first strand
Strand 2	D	228	229	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	496	500	first strand
Strand 2	D	564	577	anti-parallel
Strand 3	D	515	527	anti-parallel
Strand 4	D	534	538	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	505	507	first strand
Strand 2	D	564	577	anti-parallel
Strand 3	D	515	527	anti-parallel
Strand 4	D	543	544	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7LFW

Analysis of interatomic Contacts of Structural Units in PDB entry:
7LFW