Analysis of interatomic Contacts of Structural Units in PDB entry:
7LGN

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7LGN entry

There are 2 chains in PDB entry 7LGN (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	THR 710
B	MET 1	ALA 861

There are 63 helices in PDB entry 7LGN. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	30	37	Right-handed alpha
Helix 2	AA2	A	40	50	Right-handed alpha
Helix 3	AA3	A	51	54	Right-handed 310
Helix 4	AA4	A	61	77	Right-handed alpha
Helix 5	AA5	A	103	121	Right-handed alpha
Helix 6	AA6	A	122	124	Right-handed 310
Helix 7	AA7	A	132	145	Right-handed alpha
Helix 8	AA8	A	150	163	Right-handed alpha
Helix 9	AA9	A	180	184	Right-handed 310
Helix 10	AB1	A	196	205	Right-handed alpha
Helix 11	AB2	A	205	215	Right-handed alpha
Helix 12	AB3	A	226	230	Right-handed 310
Helix 13	AB4	A	231	240	Right-handed alpha
Helix 14	AB5	A	262	274	Right-handed alpha
Helix 15	AB6	A	318	327	Right-handed alpha
Helix 16	AB7	A	346	356	Right-handed alpha
Helix 17	AB8	A	388	391	Right-handed 310
Helix 18	AB9	A	392	407	Right-handed alpha
Helix 19	AC1	A	453	463	Right-handed alpha
Helix 20	AC2	A	483	496	Right-handed alpha
Helix 21	AC3	A	521	531	Right-handed alpha
Helix 22	AC4	A	543	550	Right-handed alpha
Helix 23	AC5	A	580	590	Right-handed alpha
Helix 24	AC6	A	602	607	Right-handed alpha
Helix 25	AC7	A	608	611	Right-handed 310
Helix 26	AC8	A	627	635	Right-handed alpha
Helix 27	AC9	A	666	668	Right-handed 310
Helix 28	AD1	A	676	693	Right-handed alpha
Helix 29	AD2	A	696	706	Right-handed alpha
Helix 30	AD3	B	27	31	Right-handed 310
Helix 31	AD4	B	32	39	Right-handed alpha
Helix 32	AD5	B	45	50	Right-handed alpha
Helix 33	AD6	B	51	56	Right-handed 310
Helix 34	AD7	B	61	77	Right-handed alpha
Helix 35	AD8	B	103	120	Right-handed alpha
Helix 36	AD9	B	133	145	Right-handed alpha
Helix 37	AE1	B	150	163	Right-handed alpha
Helix 38	AE2	B	196	205	Right-handed alpha
Helix 39	AE3	B	205	215	Right-handed alpha
Helix 40	AE4	B	234	239	Right-handed 310
Helix 41	AE5	B	262	273	Right-handed alpha
Helix 42	AE6	B	318	328	Right-handed alpha
Helix 43	AE7	B	346	355	Right-handed alpha
Helix 44	AE8	B	392	407	Right-handed alpha
Helix 45	AE9	B	440	444	Right-handed 310
Helix 46	AF1	B	453	463	Right-handed alpha
Helix 47	AF2	B	464	468	Right-handed 310
Helix 48	AF3	B	483	496	Right-handed alpha
Helix 49	AF4	B	522	531	Right-handed alpha
Helix 50	AF5	B	543	550	Right-handed alpha
Helix 51	AF6	B	580	590	Right-handed alpha
Helix 52	AF7	B	602	607	Right-handed alpha
Helix 53	AF8	B	608	611	Right-handed 310
Helix 54	AF9	B	626	636	Right-handed alpha
Helix 55	AG1	B	666	668	Right-handed 310
Helix 56	AG2	B	674	693	Right-handed alpha
Helix 57	AG3	B	696	705	Right-handed alpha
Helix 58	AG4	B	735	750	Right-handed alpha
Helix 59	AG5	B	769	778	Right-handed alpha
Helix 60	AG6	B	798	810	Right-handed alpha
Helix 61	AG7	B	814	816	Right-handed 310
Helix 62	AG8	B	823	835	Right-handed alpha
Helix 63	AG9	B	847	857	Right-handed alpha

There are 13 sheets in PDB entry 7LGN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2	9	first strand
Strand 2	A	18	24	anti-parallel
Strand 3	A	94	99	anti-parallel
Strand 4	A	84	88	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	167	169	first strand
Strand 2	A	175	178	anti-parallel
Strand 3	A	185	188	anti-parallel
Strand 4	A	191	192	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	257	260	first strand
Strand 2	A	243	247	anti-parallel
Strand 3	A	280	284	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	382	386	first strand
Strand 2	A	300	308	anti-parallel
Strand 3	A	289	295	anti-parallel
Strand 4	A	411	417	anti-parallel
Strand 5	A	430	436	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	310	312	first strand
Strand 2	A	369	371	anti-parallel

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There are 11 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	513	517	first strand
Strand 2	A	507	510	anti-parallel
Strand 3	A	500	503	anti-parallel
Strand 4	A	537	538	parallel
Strand 5	A	473	478	parallel
Strand 6	A	557	562	parallel
Strand 7	A	592	599	parallel
Strand 8	A	616	621	parallel
Strand 9	A	639	643	parallel
Strand 10	A	650	655	anti-parallel
Strand 11	A	658	664	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3	8	first strand
Strand 2	B	19	23	anti-parallel
Strand 3	B	95	99	anti-parallel
Strand 4	B	84	88	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	168	169	first strand
Strand 2	B	175	177	anti-parallel
Strand 3	B	186	188	anti-parallel
Strand 4	B	191	192	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	223	225	first strand
Strand 2	B	281	284	anti-parallel
Strand 3	B	243	244	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	383	386	first strand
Strand 2	B	300	307	anti-parallel
Strand 3	B	289	295	anti-parallel
Strand 4	B	411	417	anti-parallel
Strand 5	B	430	435	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	310	311	first strand
Strand 2	B	370	371	anti-parallel

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There are 11 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	513	517	first strand
Strand 2	B	507	510	anti-parallel
Strand 3	B	500	503	anti-parallel
Strand 4	B	537	538	parallel
Strand 5	B	473	477	parallel
Strand 6	B	557	562	parallel
Strand 7	B	592	599	parallel
Strand 8	B	616	621	parallel
Strand 9	B	639	645	parallel
Strand 10	B	648	655	anti-parallel
Strand 11	B	658	664	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	720	721	first strand
Strand 2	B	727	732	anti-parallel
Strand 3	B	840	845	parallel
Strand 4	B	756	760	parallel
Strand 5	B	783	786	parallel
Strand 6	B	818	820	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7LGN

Analysis of interatomic Contacts of Structural Units in PDB entry:
7LGN