Analysis of interatomic Contacts of Structural Units in PDB entry:
7LGP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7LGP entry

There are 2 chains in PDB entry 7LGP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2ALA 375
B
 ASN -1ALA 375
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 7LGP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 15Right-handed alpha
Helix 2
AA2
A
24 35Right-handed alpha
Helix 3
AA3
A
74 78Right-handed 310
Helix 4
AA4
A
100 118Right-handed alpha
Helix 5
AA5
A
140 151Right-handed alpha
Helix 6
AA6
A
196 200Right-handed 310
Helix 7
AA7
A
202 217Right-handed alpha
Helix 8
AA8
A
263 278Right-handed alpha
Helix 9
AA9
A
298 313Right-handed alpha
Helix 10
AB1
A
326 331Right-handed alpha
Helix 11
AB2
A
332 334Right-handed 310
Helix 12
AB3
A
356 375Right-handed alpha
Helix 13
AB4
B
3 14Right-handed alpha
Helix 14
AB5
B
24 36Right-handed alpha
Helix 15
AB6
B
74 78Right-handed 310
Helix 16
AB7
B
100 118Right-handed alpha
Helix 17
AB8
B
140 151Right-handed alpha
Helix 18
AB9
B
196 200Right-handed 310
Helix 19
AC1
B
202 217Right-handed alpha
Helix 20
AC2
B
263 278Right-handed alpha
Helix 21
AC3
B
298 313Right-handed alpha
Helix 22
AC4
B
326 332Right-handed alpha
Helix 23
AC5
B
356 375Right-handed alpha
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There are 11 sheets in PDB entry 7LGP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 42first strand
Strand 2
A
50 55anti-parallel
Strand 3
A
124 130anti-parallel
Strand 4
A
60 66parallel
Strand 5
A
157 160parallel
Strand 6
A
336 339parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 88first strand
Strand 2
A
91 93anti-parallel
Strand 3
A
353 355anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 174first strand
Strand 2
A
317 319parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
176 177first strand
Strand 2
A
293 294anti-parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
282 290first strand
Strand 2
A
179 188anti-parallel
Strand 3
A
249 258anti-parallel
Strand 4
A
230 238anti-parallel
Strand 5
B
230 238anti-parallel
Strand 6
B
249 258anti-parallel
Strand 7
B
179 188anti-parallel
Strand 8
B
282 290anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
192 193first strand
Strand 2
A
245 246anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
39 42first strand
Strand 2
B
50 55anti-parallel
Strand 3
B
124 130anti-parallel
Strand 4
B
60 66parallel
Strand 5
B
157 160parallel
Strand 6
B
336 339parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
86 88first strand
Strand 2
B
91 93anti-parallel
Strand 3
B
353 355anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
172 174first strand
Strand 2
B
317 319parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
176 177first strand
Strand 2
B
293 294anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
192 193first strand
Strand 2
B
245 246anti-parallel
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