Analysis of interatomic Contacts of Structural Units in PDB entry:
7LH9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7LH9 entry

There are 12 chains in PDB entry 7LH9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 925	VAL 1046
B	LEU 927	LEU 1043
C	PRO 929	GLY 1048
D	GLU 928	VAL 1046
E	G 1	C 12
F	G 1	C 12
G	G 1	C 12
H	G 1	C 12
I	G 1	C 12
J	G 1	C 12
K	G 1	C 12
L	G 1	C 12

There are 14 helices in PDB entry 7LH9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	968	980	Right-handed alpha
Helix 2	AA2	A	1012	1021	Right-handed alpha
Helix 3	AA3	A	1025	1046	Right-handed alpha
Helix 4	AA4	B	968	981	Right-handed alpha
Helix 5	AA5	B	1002	1004	Right-handed 310
Helix 6	AA6	B	1012	1021	Right-handed alpha
Helix 7	AA7	B	1025	1043	Right-handed alpha
Helix 8	AA8	C	968	980	Right-handed alpha
Helix 9	AA9	C	1012	1021	Right-handed alpha
Helix 10	AB1	C	1025	1048	Right-handed alpha
Helix 11	AB2	D	968	981	Right-handed alpha
Helix 12	AB3	D	1002	1004	Right-handed 310
Helix 13	AB4	D	1012	1021	Right-handed alpha
Helix 14	AB5	D	1025	1046	Right-handed alpha

There are 5 sheets in PDB entry 7LH9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	998	1002	first strand
Strand 2	A	986	991	anti-parallel
Strand 3	A	943	948	anti-parallel
Strand 4	A	932	935	anti-parallel
Strand 5	A	1006	1008	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	998	1001	first strand
Strand 2	B	987	991	anti-parallel
Strand 3	B	943	948	anti-parallel
Strand 4	B	932	935	anti-parallel
Strand 5	B	1006	1008	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	957	959	first strand
Strand 2	B	962	964	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	998	1002	first strand
Strand 2	C	986	991	anti-parallel
Strand 3	C	943	948	anti-parallel
Strand 4	C	932	935	anti-parallel
Strand 5	C	1006	1008	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	998	1001	first strand
Strand 2	D	987	991	anti-parallel
Strand 3	D	943	948	anti-parallel
Strand 4	D	932	935	anti-parallel
Strand 5	D	1006	1008	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7LH9

Analysis of interatomic Contacts of Structural Units in PDB entry:
7LH9