Analysis of interatomic Contacts of Structural Units in PDB entry:
7LHA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7LHA entry

There are 2 chains in PDB entry 7LHA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 29LYS 535
B
 MET 29LYS 535
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 7LHA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
40 48Right-handed 310
Helix 2
AA2
A
51 55Right-handed 310
Helix 3
AA3
A
57 65Right-handed alpha
Helix 4
AA4
A
79 90Right-handed alpha
Helix 5
AA5
A
92 97Right-handed alpha
Helix 6
AA6
A
106 109Right-handed 310
Helix 7
AA7
A
110 119Right-handed alpha
Helix 8
AA8
A
178 194Right-handed alpha
Helix 9
AA9
A
217 221Right-handed 310
Helix 10
AB1
A
232 236Right-handed 310
Helix 11
AB2
A
243 248Right-handed alpha
Helix 12
AB3
A
249 252Right-handed 310
Helix 13
AB4
A
269 274Right-handed alpha
Helix 14
AB5
A
280 317Right-handed alpha
Helix 15
AB6
A
319 321Right-handed 310
Helix 16
AB7
A
337 339Right-handed 310
Helix 17
AB8
A
347 352Right-handed alpha
Helix 18
AB9
A
377 386Right-handed alpha
Helix 19
AC1
A
399 405Right-handed 310
Helix 20
AC2
A
450 454Right-handed 310
Helix 21
AC3
A
459 463Right-handed 310
Helix 22
AC4
A
495 497Right-handed 310
Helix 23
AC5
A
498 517Right-handed alpha
Helix 24
AC6
A
523 535Right-handed alpha
Helix 25
AC7
B
40 48Right-handed 310
Helix 26
AC8
B
51 55Right-handed 310
Helix 27
AC9
B
57 65Right-handed alpha
Helix 28
AD1
B
79 90Right-handed alpha
Helix 29
AD2
B
92 97Right-handed alpha
Helix 30
AD3
B
106 109Right-handed 310
Helix 31
AD4
B
110 119Right-handed alpha
Helix 32
AD5
B
178 194Right-handed alpha
Helix 33
AD6
B
217 221Right-handed 310
Helix 34
AD7
B
232 236Right-handed 310
Helix 35
AD8
B
243 248Right-handed alpha
Helix 36
AD9
B
249 252Right-handed 310
Helix 37
AE1
B
269 274Right-handed alpha
Helix 38
AE2
B
280 317Right-handed alpha
Helix 39
AE3
B
337 339Right-handed 310
Helix 40
AE4
B
347 352Right-handed alpha
Helix 41
AE5
B
377 386Right-handed alpha
Helix 42
AE6
B
399 405Right-handed 310
Helix 43
AE7
B
495 497Right-handed 310
Helix 44
AE8
B
498 517Right-handed alpha
Helix 45
AE9
B
523 535Right-handed alpha
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There are 8 sheets in PDB entry 7LHA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 174first strand
Strand 2
A
157 160anti-parallel
Strand 3
A
140 144anti-parallel
Strand 4
A
122 128parallel
Strand 5
A
201 207parallel
Strand 6
A
30 36parallel
Strand 7
A
323 329parallel
Strand 8
A
355 358anti-parallel
Strand 9
A
68 70anti-parallel
Strand 10
A
367 369parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 74first strand
Strand 2
A
373 374parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
334 335first strand
Strand 2
A
341 342anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
414 419first strand
Strand 2
A
431 436anti-parallel
Strand 3
A
439 444anti-parallel
Strand 4
A
476 481anti-parallel
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There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
172 174first strand
Strand 2
B
157 160anti-parallel
Strand 3
B
140 144anti-parallel
Strand 4
B
122 127parallel
Strand 5
B
201 207parallel
Strand 6
B
30 36parallel
Strand 7
B
323 329parallel
Strand 8
B
355 358anti-parallel
Strand 9
B
68 70anti-parallel
Strand 10
B
367 369parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
73 74first strand
Strand 2
B
373 374parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
334 335first strand
Strand 2
B
341 342anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
414 419first strand
Strand 2
B
431 436anti-parallel
Strand 3
B
439 444anti-parallel
Strand 4
B
476 481anti-parallel
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