Analysis of interatomic Contacts of Structural Units in PDB entry:
7LHG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7LHG entry

There are 4 chains in PDB entry 7LHG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	VAL 1	GLN 808
D	ALA 1	LYS 215
K	ASP 23	ARG 178
G	TRP 21	PRO 336

There are 10 helices in PDB entry 7LHG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	19	25	Right-handed alpha
Helix 2	AA2	C	72	78	Right-handed alpha
Helix 3	AA3	C	122	126	Right-handed 310
Helix 4	AA4	C	450	459	Right-handed alpha
Helix 5	AA5	D	73	76	Right-handed 310
Helix 6	AA6	D	117	121	Right-handed 310
Helix 7	AA7	D	127	132	Right-handed 310
Helix 8	AA8	K	153	158	Right-handed alpha
Helix 9	AA9	G	194	200	Right-handed alpha
Helix 10	AB1	G	232	237	Right-handed alpha

There are 28 sheets in PDB entry 7LHG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	31	32	first strand
Strand 2	C	50	53	anti-parallel
Strand 3	C	68	69	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	41	42	first strand
Strand 2	C	35	38	anti-parallel
Strand 3	C	116	120	parallel
Strand 4	C	107	111	anti-parallel

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There are 18 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	467	469	first strand
Strand 2	C	487	495	anti-parallel
Strand 3	C	471	476	anti-parallel
Strand 4	C	435	443	anti-parallel
Strand 5	C	414	426	anti-parallel
Strand 6	C	397	410	anti-parallel
Strand 7	C	382	394	anti-parallel
Strand 8	C	370	379	anti-parallel
Strand 9	C	356	364	anti-parallel
Strand 10	C	336	344	anti-parallel
Strand 11	C	239	248	anti-parallel
Strand 12	C	222	231	anti-parallel
Strand 13	C	202	217	anti-parallel
Strand 14	C	181	193	anti-parallel
Strand 15	C	167	178	anti-parallel
Strand 16	C	145	155	anti-parallel
Strand 17	C	624	634	anti-parallel
Strand 18	C	641	643	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	641	643	first strand
Strand 2	C	624	634	anti-parallel
Strand 3	C	610	617	anti-parallel
Strand 4	C	598	605	anti-parallel
Strand 5	C	578	588	anti-parallel
Strand 6	C	571	572	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	594	595	first strand
Strand 2	C	578	588	anti-parallel
Strand 3	C	571	572	anti-parallel

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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	594	595	first strand
Strand 2	C	578	588	anti-parallel
Strand 3	C	563	568	anti-parallel
Strand 4	C	551	558	anti-parallel
Strand 5	C	535	546	anti-parallel
Strand 6	C	521	530	anti-parallel
Strand 7	C	500	511	anti-parallel
Strand 8	C	487	495	anti-parallel
Strand 9	C	467	469	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	265	266	first strand
Strand 2	C	293	294	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	273	277	first strand
Strand 2	C	306	311	anti-parallel
Strand 3	C	317	322	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	677	680	first strand
Strand 2	C	652	656	anti-parallel
Strand 3	C	718	722	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	689	690	first strand
Strand 2	C	710	711	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	702	704	first strand
Strand 2	C	725	727	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	730	732	first strand
Strand 2	C	767	769	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	756	758	first strand
Strand 2	C	748	750	anti-parallel
Strand 3	C	778	781	anti-parallel
Strand 4	C	784	788	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	2	4	first strand
Strand 2	D	21	24	anti-parallel
Strand 3	D	64	66	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	8	12	first strand
Strand 2	D	102	116	parallel
Strand 3	K	46	47	anti-parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	56	59	first strand
Strand 2	D	31	38	anti-parallel
Strand 3	D	84	93	anti-parallel
Strand 4	D	102	116	anti-parallel
Strand 5	K	169	177	parallel
Strand 6	K	84	89	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	50	52	first strand
Strand 2	D	69	71	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	177	181	first strand
Strand 2	D	140	145	anti-parallel
Strand 3	D	133	137	anti-parallel
Strand 4	D	211	212	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	171	172	first strand
Strand 2	D	152	155	anti-parallel
Strand 3	D	190	194	anti-parallel
Strand 4	D	202	204	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	66	70	first strand
Strand 2	K	144	148	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	110	112	first strand
Strand 2	K	150	152	anti-parallel

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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	57	61	first strand
Strand 2	G	22	29	anti-parallel
Strand 3	G	180	184	anti-parallel
Strand 4	G	77	85	anti-parallel
Strand 5	G	120	130	anti-parallel
Strand 6	G	109	111	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	57	61	first strand
Strand 2	G	22	29	anti-parallel
Strand 3	G	180	184	anti-parallel
Strand 4	G	77	85	anti-parallel
Strand 5	G	176	177	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	33	40	first strand
Strand 2	G	207	213	parallel
Strand 3	G	167	169	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	47	49	first strand
Strand 2	G	155	159	anti-parallel
Strand 3	G	99	101	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	240	241	first strand
Strand 2	G	303	312	anti-parallel
Strand 3	G	244	249	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	240	241	first strand
Strand 2	G	303	312	anti-parallel
Strand 3	G	282	287	anti-parallel
Strand 4	G	274	276	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	256	261	first strand
Strand 2	G	329	334	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7LHG

Analysis of interatomic Contacts of Structural Units in PDB entry:
7LHG