Analysis of interatomic Contacts of Structural Units in PDB entry:
7LHH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7LHH entry

There are 4 chains in PDB entry 7LHH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	VAL 1	GLN 808
D	ALA 1	LYS 215
K	SER 22	ARG 178
G	TRP 21	PRO 336

There are 8 helices in PDB entry 7LHH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	15	24	Right-handed alpha
Helix 2	AA2	C	73	78	Right-handed alpha
Helix 3	AA3	C	122	126	Right-handed 310
Helix 4	AA4	C	254	259	Right-handed alpha
Helix 5	AA5	C	450	460	Right-handed alpha
Helix 6	AA6	D	73	78	Right-handed alpha
Helix 7	AA7	K	153	158	Right-handed alpha
Helix 8	AA8	G	195	200	Right-handed alpha

There are 30 sheets in PDB entry 7LHH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	31	32	first strand
Strand 2	C	50	51	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	41	42	first strand
Strand 2	C	35	38	anti-parallel
Strand 3	C	116	120	parallel
Strand 4	C	107	111	anti-parallel

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There are 16 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	469	471	first strand
Strand 2	C	439	443	anti-parallel
Strand 3	C	415	426	anti-parallel
Strand 4	C	397	409	anti-parallel
Strand 5	C	382	394	anti-parallel
Strand 6	C	370	379	anti-parallel
Strand 7	C	356	366	anti-parallel
Strand 8	C	336	345	anti-parallel
Strand 9	C	240	248	anti-parallel
Strand 10	C	222	230	anti-parallel
Strand 11	C	200	217	anti-parallel
Strand 12	C	182	195	anti-parallel
Strand 13	C	167	174	anti-parallel
Strand 14	C	150	155	anti-parallel
Strand 15	C	624	635	anti-parallel
Strand 16	C	146	148	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	146	148	first strand
Strand 2	C	624	635	anti-parallel
Strand 3	C	641	643	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	641	643	first strand
Strand 2	C	624	635	anti-parallel
Strand 3	C	609	618	anti-parallel
Strand 4	C	594	604	anti-parallel
Strand 5	C	579	588	anti-parallel
Strand 6	C	571	572	anti-parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	571	572	first strand
Strand 2	C	579	588	anti-parallel
Strand 3	C	563	569	anti-parallel
Strand 4	C	551	558	anti-parallel
Strand 5	C	535	546	anti-parallel
Strand 6	C	521	530	anti-parallel
Strand 7	C	502	511	anti-parallel
Strand 8	C	489	491	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	158	159	first strand
Strand 2	C	621	622	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	282	287	first strand
Strand 2	C	273	277	anti-parallel
Strand 3	C	307	311	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	435	436	first strand
Strand 2	C	475	478	anti-parallel
Strand 3	C	485	486	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	678	680	first strand
Strand 2	C	652	656	anti-parallel
Strand 3	C	718	722	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	689	691	first strand
Strand 2	C	709	711	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	765	769	first strand
Strand 2	C	730	736	anti-parallel
Strand 3	C	800	804	parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	756	759	first strand
Strand 2	C	748	750	anti-parallel
Strand 3	C	776	781	anti-parallel
Strand 4	C	784	790	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	2	3	first strand
Strand 2	D	19	24	anti-parallel
Strand 3	D	64	71	anti-parallel
Strand 4	D	50	52	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	9	12	first strand
Strand 2	D	103	116	parallel
Strand 3	D	84	93	anti-parallel
Strand 4	D	31	38	anti-parallel
Strand 5	D	56	59	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	9	12	first strand
Strand 2	D	103	116	parallel
Strand 3	K	169	177	parallel
Strand 4	K	84	89	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	133	137	first strand
Strand 2	D	140	144	anti-parallel
Strand 3	D	178	180	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	171	172	first strand
Strand 2	D	152	155	anti-parallel
Strand 3	D	190	193	anti-parallel
Strand 4	D	202	204	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	206	207	first strand
Strand 2	D	212	213	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	225	227	first strand
Strand 2	K	23	28	parallel
Strand 3	G	328	334	anti-parallel
Strand 4	G	254	260	anti-parallel
Strand 5	G	296	298	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	66	69	first strand
Strand 2	K	145	152	anti-parallel
Strand 3	K	110	115	anti-parallel
Strand 4	K	100	101	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	136	138	first strand
Strand 2	K	141	143	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	144	145	first strand
Strand 2	G	57	59	anti-parallel
Strand 3	G	26	29	anti-parallel
Strand 4	G	178	180	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	47	50	first strand
Strand 2	G	154	157	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	76	84	first strand
Strand 2	G	120	131	anti-parallel
Strand 3	G	109	111	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	89	91	first strand
Strand 2	G	97	99	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	167	169	first strand
Strand 2	G	211	213	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	217	219	first strand
Strand 2	G	247	249	anti-parallel
Strand 3	G	303	304	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	240	241	first strand
Strand 2	G	307	312	anti-parallel
Strand 3	G	244	245	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	240	241	first strand
Strand 2	G	307	312	anti-parallel
Strand 3	G	282	287	anti-parallel
Strand 4	G	274	276	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7LHH

Analysis of interatomic Contacts of Structural Units in PDB entry:
7LHH