Analysis of interatomic Contacts of Structural Units in PDB entry:
7LHI

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7LHI entry

There are 5 chains in PDB entry 7LHI (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	VAL 35	SER 758
G	TRP 21	PRO 336
F	HIS 9	ASN 148
D	ALA 1	LYS 215
K	LEU 9	ARG 157

There are 10 helices in PDB entry 7LHI. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	106	113	Right-handed alpha
Helix 2	AA2	C	485	490	Right-handed alpha
Helix 3	AA3	G	194	199	Right-handed alpha
Helix 4	AA4	G	232	236	Right-handed 310
Helix 5	AA5	F	17	21	Right-handed 310
Helix 6	AA6	D	73	78	Right-handed alpha
Helix 7	AA7	D	159	166	Right-handed alpha
Helix 8	AA8	K	30	35	Right-handed alpha
Helix 9	AA9	K	58	62	Right-handed alpha
Helix 10	AB1	K	132	139	Right-handed alpha

There are 22 sheets in PDB entry 7LHI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	70	72	first strand
Strand 2	C	75	78	anti-parallel

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There are 14 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	448	454	first strand
Strand 2	C	432	444	anti-parallel
Strand 3	C	416	426	anti-parallel
Strand 4	C	404	411	anti-parallel
Strand 5	C	390	400	anti-parallel
Strand 6	C	370	379	anti-parallel
Strand 7	C	275	277	anti-parallel
Strand 8	C	256	263	anti-parallel
Strand 9	C	245	251	anti-parallel
Strand 10	C	216	222	anti-parallel
Strand 11	C	206	211	anti-parallel
Strand 12	C	179	185	anti-parallel
Strand 13	C	658	668	anti-parallel
Strand 14	C	675	677	anti-parallel

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There are 16 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	448	454	first strand
Strand 2	C	432	444	anti-parallel
Strand 3	C	416	426	anti-parallel
Strand 4	C	404	411	anti-parallel
Strand 5	C	390	400	anti-parallel
Strand 6	C	370	379	anti-parallel
Strand 7	C	279	281	anti-parallel
Strand 8	C	256	263	anti-parallel
Strand 9	C	245	251	anti-parallel
Strand 10	C	216	222	anti-parallel
Strand 11	C	206	211	anti-parallel
Strand 12	C	179	185	anti-parallel
Strand 13	C	658	668	anti-parallel
Strand 14	C	644	650	anti-parallel
Strand 15	C	630	639	anti-parallel
Strand 16	C	612	620	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	189	190	first strand
Strand 2	C	200	201	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	301	302	first strand
Strand 2	C	325	326	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	316	322	first strand
Strand 2	C	306	311	anti-parallel
Strand 3	C	344	345	anti-parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	468	470	first strand
Strand 2	C	508	512	anti-parallel
Strand 3	C	519	524	anti-parallel
Strand 4	C	536	544	anti-parallel
Strand 5	C	555	564	anti-parallel
Strand 6	C	570	580	anti-parallel
Strand 7	C	585	592	anti-parallel
Strand 8	C	602	603	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	711	714	first strand
Strand 2	C	687	690	anti-parallel
Strand 3	C	755	756	parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	57	61	first strand
Strand 2	G	23	29	anti-parallel
Strand 3	G	176	183	anti-parallel
Strand 4	G	76	85	anti-parallel
Strand 5	G	130	131	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	33	40	first strand
Strand 2	G	207	213	parallel
Strand 3	G	167	169	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	47	50	first strand
Strand 2	G	154	157	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	69	70	first strand
Strand 2	G	135	136	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	218	219	first strand
Strand 2	G	242	249	anti-parallel
Strand 3	G	303	312	anti-parallel
Strand 4	G	282	287	anti-parallel
Strand 5	G	274	276	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	295	298	first strand
Strand 2	G	254	260	anti-parallel
Strand 3	G	330	332	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	45	48	first strand
Strand 2	F	116	123	anti-parallel
Strand 3	F	83	87	anti-parallel
Strand 4	F	73	74	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	57	62	first strand
Strand 2	F	142	147	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	2	4	first strand
Strand 2	D	17	24	anti-parallel
Strand 3	D	64	71	anti-parallel
Strand 4	D	50	52	anti-parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	9	12	first strand
Strand 2	D	113	116	parallel
Strand 3	D	85	92	anti-parallel
Strand 4	D	102	110	anti-parallel
Strand 5	K	147	156	parallel
Strand 6	K	63	68	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	34	38	first strand
Strand 2	D	85	92	anti-parallel
Strand 3	D	102	110	anti-parallel
Strand 4	K	147	156	parallel
Strand 5	K	81	82	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	31	32	first strand
Strand 2	D	58	59	anti-parallel

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There are 7 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	156	157	first strand
Strand 2	D	190	191	anti-parallel
Strand 3	D	203	208	anti-parallel
Strand 4	D	211	214	anti-parallel
Strand 5	D	134	137	anti-parallel
Strand 6	D	140	144	anti-parallel
Strand 7	D	178	181	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	45	52	first strand
Strand 2	K	120	131	anti-parallel
Strand 3	K	89	92	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7LHI

Analysis of interatomic Contacts of Structural Units in PDB entry:
7LHI