Analysis of interatomic Contacts of Structural Units in PDB entry:
7LI5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7LI5 entry

There are 2 chains in PDB entry 7LI5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 205VAL 424
B
 GLY 205VAL 424
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 7LI5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
260 266Right-handed 310
Helix 2
AA2
A
272 280Right-handed alpha
Helix 3
AA3
A
281 283Right-handed 310
Helix 4
AA4
A
359 371Right-handed alpha
Helix 5
AA5
A
374 383Right-handed alpha
Helix 6
AA6
B
259 263Right-handed alpha
Helix 7
AA7
B
264 266Right-handed 310
Helix 8
AA8
B
272 280Right-handed alpha
Helix 9
AA9
B
281 283Right-handed 310
Helix 10
AB1
B
359 371Right-handed alpha
Helix 11
AB2
B
374 383Right-handed alpha
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There are 3 sheets in PDB entry 7LI5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
208 210first strand
Strand 2
A
253 258anti-parallel
Strand 3
A
417 424parallel
Strand 4
A
285 292anti-parallel
Strand 5
A
399 409parallel
Strand 6
A
385 393anti-parallel
Strand 7
A
319 328anti-parallel
Strand 8
A
331 341anti-parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
343 345first strand
Strand 2
A
348 357anti-parallel
Strand 3
A
304 314anti-parallel
Strand 4
A
217 230anti-parallel
Strand 5
A
233 242anti-parallel
Strand 6
B
233 242anti-parallel
Strand 7
B
217 230anti-parallel
Strand 8
B
305 314anti-parallel
Strand 9
B
348 357anti-parallel
Strand 10
B
343 345anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
208 210first strand
Strand 2
B
253 258anti-parallel
Strand 3
B
417 424parallel
Strand 4
B
285 292anti-parallel
Strand 5
B
399 409parallel
Strand 6
B
385 393anti-parallel
Strand 7
B
320 328anti-parallel
Strand 8
B
331 340anti-parallel
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