Analysis of interatomic Contacts of Structural Units in PDB entry:
7LI6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7LI6 entry

There are 3 chains in PDB entry 7LI6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 79PRO 617
B
 GLN 20THR 137
C
 ASP 21ILE 130
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 7LI6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
82 87Right-handed alpha
Helix 2
AA2
A
88 93Right-handed alpha
Helix 3
AA3
A
103 112Right-handed alpha
Helix 4
AA4
A
117 129Right-handed alpha
Helix 5
AA5
A
129 143Right-handed alpha
Helix 6
AA6
A
149 153Right-handed 310
Helix 7
AA7
A
159 190Right-handed alpha
Helix 8
AA8
A
226 235Right-handed alpha
Helix 9
AA9
A
252 268Right-handed alpha
Helix 10
AB1
A
280 285Right-handed alpha
Helix 11
AB2
A
285 301Right-handed alpha
Helix 12
AB3
A
305 313Right-handed alpha
Helix 13
AB4
A
317 322Right-handed alpha
Helix 14
AB5
A
325 338Right-handed alpha
Helix 15
AB6
A
342 348Right-handed alpha
Helix 16
AB7
A
360 391Right-handed alpha
Helix 17
AB8
A
393 397Right-handed 310
Helix 18
AB9
A
404 415Right-handed alpha
Helix 19
AC1
A
419 443Right-handed alpha
Helix 20
AC2
A
443 454Right-handed alpha
Helix 21
AC3
A
457 462Right-handed alpha
Helix 22
AC4
A
463 476Right-handed alpha
Helix 23
AC5
A
484 490Right-handed alpha
Helix 24
AC6
A
490 495Right-handed alpha
Helix 25
AC7
A
498 515Right-handed alpha
Helix 26
AC8
A
517 530Right-handed alpha
Helix 27
AC9
A
534 544Right-handed alpha
Helix 28
AD1
A
544 559Right-handed alpha
Helix 29
AD2
A
572 585Right-handed alpha
Helix 30
AD3
A
587 600Right-handed alpha
Helix 31
AD4
A
603 613Right-handed alpha
Helix 32
AD5
B
47 51Right-handed 310
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There are 7 sheets in PDB entry 7LI6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
22 25first strand
Strand 2
B
37 44anti-parallel
Strand 3
B
97 102anti-parallel
Strand 4
B
89 90anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
77 79first strand
Strand 2
B
64 70anti-parallel
Strand 3
B
53 58anti-parallel
Strand 4
B
116 117anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
77 79first strand
Strand 2
B
64 70anti-parallel
Strand 3
B
53 58anti-parallel
Strand 4
B
112 113anti-parallel
Strand 5
B
134 135anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
25 26first strand
Strand 2
C
43 44anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
30 31first strand
Strand 2
C
126 128parallel
Strand 3
C
109 110anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
77 78first strand
Strand 2
C
69 73anti-parallel
Strand 3
C
57 61anti-parallel
Strand 4
C
112 114anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
87 89first strand
Strand 2
C
96 98anti-parallel
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