Analysis of interatomic Contacts of Structural Units in PDB entry:
7LI7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7LI7 entry

There are 3 chains in PDB entry 7LI7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 79GLU 615
B
 GLN 20THR 137
C
 ASP 21ILE 130
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 7LI7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
84 97Right-handed alpha
Helix 2
AA2
A
98 113Right-handed alpha
Helix 3
AA3
A
114 118Right-handed 310
Helix 4
AA4
A
121 144Right-handed alpha
Helix 5
AA5
A
148 154Right-handed 310
Helix 6
AA6
A
155 158Right-handed 310
Helix 7
AA7
A
159 190Right-handed alpha
Helix 8
AA8
A
226 235Right-handed alpha
Helix 9
AA9
A
238 242Right-handed 310
Helix 10
AB1
A
252 271Right-handed alpha
Helix 11
AB2
A
273 282Right-handed alpha
Helix 12
AB3
A
285 300Right-handed alpha
Helix 13
AB4
A
306 313Right-handed alpha
Helix 14
AB5
A
325 338Right-handed alpha
Helix 15
AB6
A
342 349Right-handed alpha
Helix 16
AB7
A
356 391Right-handed alpha
Helix 17
AB8
A
403 417Right-handed alpha
Helix 18
AB9
A
422 448Right-handed alpha
Helix 19
AC1
A
449 454Right-handed alpha
Helix 20
AC2
A
454 461Right-handed alpha
Helix 21
AC3
A
461 484Right-handed alpha
Helix 22
AC4
A
486 496Right-handed alpha
Helix 23
AC5
A
498 514Right-handed alpha
Helix 24
AC6
A
517 530Right-handed alpha
Helix 25
AC7
A
536 541Right-handed alpha
Helix 26
AC8
A
543 559Right-handed alpha
Helix 27
AC9
A
571 585Right-handed alpha
Helix 28
AD1
A
587 600Right-handed alpha
Helix 29
AD2
A
603 612Right-handed alpha
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There are 9 sheets in PDB entry 7LI7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
24 25first strand
Strand 2
B
41 42anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 39first strand
Strand 2
B
97 102anti-parallel
Strand 3
B
87 92anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
77 79first strand
Strand 2
B
64 70anti-parallel
Strand 3
B
53 58anti-parallel
Strand 4
B
116 117anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
77 79first strand
Strand 2
B
64 70anti-parallel
Strand 3
B
53 58anti-parallel
Strand 4
B
112 113anti-parallel
Strand 5
B
134 135anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
25 27first strand
Strand 2
C
39 44anti-parallel
Strand 3
C
94 99anti-parallel
Strand 4
C
89 91anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
30 32first strand
Strand 2
C
126 129parallel
Strand 3
C
109 114anti-parallel
Strand 4
C
58 62anti-parallel
Strand 5
C
69 70anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
30 32first strand
Strand 2
C
126 129parallel
Strand 3
C
109 114anti-parallel
Strand 4
C
121 122anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
50 51first strand
Strand 2
C
54 55anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
72 73first strand
Strand 2
C
77 78anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il