Analysis of interatomic Contacts of Structural Units in PDB entry:
7LIX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7LIX entry

There are 7 chains in PDB entry 7LIX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 36LYS 254
B
 ALA 16GLY 71
B
 CYS 73SER 177
C
 MET 1GLY 71
C
 CYS 73SER 177
D
 MET 1GLY 71
D
 CYS 73SER 177
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 7LIX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 49Right-handed alpha
Helix 2
AA2
A
86 104Right-handed alpha
Helix 3
AA3
A
106 111Right-handed alpha
Helix 4
AA4
A
126 132Right-handed alpha
Helix 5
AA5
A
167 171Right-handed 310
Helix 6
AA6
A
172 176Right-handed 310
Helix 7
AA7
A
200 205Right-handed 310
Helix 8
AA8
A
244 254Right-handed alpha
Helix 9
AA9
B
21 30Right-handed alpha
Helix 10
AB1
B
33 42Right-handed alpha
Helix 11
AB2
B
47 63Right-handed alpha
Helix 12
AB3
B
64 68Right-handed 310
Helix 13
AB4
B
75 100Right-handed alpha
Helix 14
AB5
B
102 109Right-handed alpha
Helix 15
AB6
B
112 121Right-handed alpha
Helix 16
AB7
B
123 143Right-handed alpha
Helix 17
AB8
B
158 177Right-handed alpha
Helix 18
AB9
C
3 11Right-handed alpha
Helix 19
AC1
C
21 30Right-handed alpha
Helix 20
AC2
C
33 46Right-handed alpha
Helix 21
AC3
C
47 63Right-handed alpha
Helix 22
AC4
C
64 68Right-handed 310
Helix 23
AC5
C
75 100Right-handed alpha
Helix 24
AC6
C
102 109Right-handed alpha
Helix 25
AC7
C
112 121Right-handed alpha
Helix 26
AC8
C
123 143Right-handed alpha
Helix 27
AC9
C
158 177Right-handed alpha
Helix 28
AD1
D
2 11Right-handed alpha
Helix 29
AD2
D
21 31Right-handed alpha
Helix 30
AD3
D
33 46Right-handed alpha
Helix 31
AD4
D
47 63Right-handed alpha
Helix 32
AD5
D
64 68Right-handed 310
Helix 33
AD6
D
75 100Right-handed alpha
Helix 34
AD7
D
102 109Right-handed alpha
Helix 35
AD8
D
112 121Right-handed alpha
Helix 36
AD9
D
123 143Right-handed alpha
Helix 37
AE1
D
158 176Right-handed alpha
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There are 4 sheets in PDB entry 7LIX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 66first strand
Strand 2
A
75 82anti-parallel
Strand 3
B
17 20anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 146first strand
Strand 2
A
149 156anti-parallel
Strand 3
C
16 20anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 161first strand
Strand 2
A
164 165anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
213 220first strand
Strand 2
A
233 240anti-parallel
Strand 3
D
17 20anti-parallel
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