Analysis of interatomic Contacts of Structural Units in PDB entry:
7LJE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7LJE entry

There are 4 chains in PDB entry 7LJE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 1287GLN 1661
B
 LYS 1287PHE 1666
C
 LYS 1287GLN 1661
D
 LYS 1287PHE 1666
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 7LJE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1296 1314Right-handed alpha
Helix 2
AA2
A
1336 1344Right-handed alpha
Helix 3
AA3
A
1406 1408Right-handed 310
Helix 4
AA4
A
1409 1429Right-handed alpha
Helix 5
AA5
A
1459 1477Right-handed alpha
Helix 6
AA6
A
1486 1493Right-handed alpha
Helix 7
AA7
A
1497 1501Right-handed 310
Helix 8
AA8
A
1507 1522Right-handed alpha
Helix 9
AA9
A
1580 1592Right-handed alpha
Helix 10
AB1
A
1603 1608Right-handed alpha
Helix 11
AB2
A
1627 1638Right-handed alpha
Helix 12
AB3
A
1643 1660Right-handed alpha
Helix 13
AB4
B
1289 1293Right-handed 310
Helix 14
AB5
B
1296 1314Right-handed alpha
Helix 15
AB6
B
1336 1344Right-handed alpha
Helix 16
AB7
B
1406 1408Right-handed 310
Helix 17
AB8
B
1409 1429Right-handed alpha
Helix 18
AB9
B
1459 1477Right-handed alpha
Helix 19
AC1
B
1486 1493Right-handed alpha
Helix 20
AC2
B
1497 1501Right-handed 310
Helix 21
AC3
B
1507 1522Right-handed alpha
Helix 22
AC4
B
1580 1592Right-handed alpha
Helix 23
AC5
B
1603 1608Right-handed alpha
Helix 24
AC6
B
1627 1638Right-handed alpha
Helix 25
AC7
B
1643 1660Right-handed alpha
Helix 26
AC8
C
1289 1293Right-handed 310
Helix 27
AC9
C
1296 1314Right-handed alpha
Helix 28
AD1
C
1336 1344Right-handed alpha
Helix 29
AD2
C
1406 1408Right-handed 310
Helix 30
AD3
C
1409 1429Right-handed alpha
Helix 31
AD4
C
1459 1477Right-handed alpha
Helix 32
AD5
C
1486 1493Right-handed alpha
Helix 33
AD6
C
1497 1501Right-handed 310
Helix 34
AD7
C
1507 1522Right-handed alpha
Helix 35
AD8
C
1580 1592Right-handed alpha
Helix 36
AD9
C
1603 1608Right-handed alpha
Helix 37
AE1
C
1627 1638Right-handed alpha
Helix 38
AE2
C
1643 1660Right-handed alpha
Helix 39
AE3
D
1296 1314Right-handed alpha
Helix 40
AE4
D
1336 1344Right-handed alpha
Helix 41
AE5
D
1406 1408Right-handed 310
Helix 42
AE6
D
1409 1429Right-handed alpha
Helix 43
AE7
D
1459 1477Right-handed alpha
Helix 44
AE8
D
1486 1493Right-handed alpha
Helix 45
AE9
D
1497 1501Right-handed 310
Helix 46
AF1
D
1507 1522Right-handed alpha
Helix 47
AF2
D
1580 1592Right-handed alpha
Helix 48
AF3
D
1603 1608Right-handed alpha
Helix 49
AF4
D
1627 1638Right-handed alpha
Helix 50
AF5
D
1643 1660Right-handed alpha
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There are 4 sheets in PDB entry 7LJE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1321 1334first strand
Strand 2
A
1352 1366anti-parallel
Strand 3
A
1369 1381anti-parallel
Strand 4
A
1392 1400anti-parallel
Strand 5
A
1432 1436parallel
Strand 6
A
1595 1599anti-parallel
Strand 7
A
1482 1485anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1321 1334first strand
Strand 2
B
1352 1366anti-parallel
Strand 3
B
1369 1381anti-parallel
Strand 4
B
1392 1400anti-parallel
Strand 5
B
1432 1436parallel
Strand 6
B
1595 1599anti-parallel
Strand 7
B
1482 1485anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1321 1334first strand
Strand 2
C
1352 1366anti-parallel
Strand 3
C
1369 1381anti-parallel
Strand 4
C
1392 1400anti-parallel
Strand 5
C
1432 1436parallel
Strand 6
C
1595 1599anti-parallel
Strand 7
C
1482 1485anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
1321 1334first strand
Strand 2
D
1352 1366anti-parallel
Strand 3
D
1369 1381anti-parallel
Strand 4
D
1392 1400anti-parallel
Strand 5
D
1432 1436parallel
Strand 6
D
1595 1599anti-parallel
Strand 7
D
1482 1485anti-parallel
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