Analysis of interatomic Contacts of Structural Units in PDB entry:
7LKK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7LKK entry

There are 4 chains in PDB entry 7LKK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN -1ILE 409
B
 MET 1ILE 409
C
 GLN 2ILE 409
D
 MET 1ILE 409
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 81 helices in PDB entry 7LKK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
37 44Right-handed alpha
Helix 2
AA2
A
67 71Right-handed 310
Helix 3
AA3
A
81 93Right-handed alpha
Helix 4
AA4
A
94 98Right-handed 310
Helix 5
AA5
A
100 114Right-handed alpha
Helix 6
AA6
A
128 134Right-handed alpha
Helix 7
AA7
A
151 167Right-handed alpha
Helix 8
AA8
A
186 200Right-handed alpha
Helix 9
AA9
A
211 221Right-handed alpha
Helix 10
AB1
A
223 226Right-handed 310
Helix 11
AB2
A
227 234Right-handed alpha
Helix 12
AB3
A
244 251Right-handed alpha
Helix 13
AB4
A
266 277Right-handed alpha
Helix 14
AB5
A
285 292Right-handed alpha
Helix 15
AB6
A
298 305Right-handed alpha
Helix 16
AB7
A
315 319Right-handed 310
Helix 17
AB8
A
323 335Right-handed alpha
Helix 18
AB9
A
338 351Right-handed alpha
Helix 19
AC1
A
351 358Right-handed alpha
Helix 20
AC2
A
386 395Right-handed alpha
Helix 21
AC3
B
37 44Right-handed alpha
Helix 22
AC4
B
67 71Right-handed 310
Helix 23
AC5
B
81 93Right-handed alpha
Helix 24
AC6
B
94 98Right-handed 310
Helix 25
AC7
B
100 114Right-handed alpha
Helix 26
AC8
B
128 135Right-handed alpha
Helix 27
AC9
B
151 167Right-handed alpha
Helix 28
AD1
B
186 200Right-handed alpha
Helix 29
AD2
B
211 221Right-handed alpha
Helix 30
AD3
B
223 226Right-handed 310
Helix 31
AD4
B
227 234Right-handed alpha
Helix 32
AD5
B
244 252Right-handed alpha
Helix 33
AD6
B
266 277Right-handed alpha
Helix 34
AD7
B
285 292Right-handed alpha
Helix 35
AD8
B
298 305Right-handed alpha
Helix 36
AD9
B
315 319Right-handed 310
Helix 37
AE1
B
323 335Right-handed alpha
Helix 38
AE2
B
338 351Right-handed alpha
Helix 39
AE3
B
351 358Right-handed alpha
Helix 40
AE4
B
386 395Right-handed alpha
Helix 41
AE5
C
37 44Right-handed alpha
Helix 42
AE6
C
67 71Right-handed 310
Helix 43
AE7
C
81 93Right-handed alpha
Helix 44
AE8
C
94 98Right-handed 310
Helix 45
AE9
C
100 114Right-handed alpha
Helix 46
AF1
C
128 135Right-handed alpha
Helix 47
AF2
C
151 167Right-handed alpha
Helix 48
AF3
C
186 200Right-handed alpha
Helix 49
AF4
C
211 221Right-handed alpha
Helix 50
AF5
C
223 226Right-handed 310
Helix 51
AF6
C
227 234Right-handed alpha
Helix 52
AF7
C
244 251Right-handed alpha
Helix 53
AF8
C
266 277Right-handed alpha
Helix 54
AF9
C
285 292Right-handed alpha
Helix 55
AG1
C
298 305Right-handed alpha
Helix 56
AG2
C
315 319Right-handed 310
Helix 57
AG3
C
323 335Right-handed alpha
Helix 58
AG4
C
338 351Right-handed alpha
Helix 59
AG5
C
351 358Right-handed alpha
Helix 60
AG6
C
386 395Right-handed alpha
Helix 61
AG7
D
37 44Right-handed alpha
Helix 62
AG8
D
67 71Right-handed 310
Helix 63
AG9
D
81 93Right-handed alpha
Helix 64
AH1
D
94 98Right-handed 310
Helix 65
AH2
D
100 114Right-handed alpha
Helix 66
AH3
D
128 135Right-handed alpha
Helix 67
AH4
D
151 167Right-handed alpha
Helix 68
AH5
D
186 201Right-handed alpha
Helix 69
AH6
D
211 221Right-handed alpha
Helix 70
AH7
D
223 226Right-handed 310
Helix 71
AH8
D
227 234Right-handed alpha
Helix 72
AH9
D
244 250Right-handed alpha
Helix 73
AI1
D
251 253Right-handed 310
Helix 74
AI2
D
266 277Right-handed alpha
Helix 75
AI3
D
285 292Right-handed alpha
Helix 76
AI4
D
298 305Right-handed alpha
Helix 77
AI5
D
315 319Right-handed 310
Helix 78
AI6
D
323 334Right-handed alpha
Helix 79
AI7
D
338 351Right-handed alpha
Helix 80
AI8
D
351 358Right-handed alpha
Helix 81
AI9
D
386 395Right-handed alpha
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There are 8 sheets in PDB entry 7LKK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 36first strand
Strand 2
A
19 27anti-parallel
Strand 3
A
3 11anti-parallel
Strand 4
A
48 59parallel
Strand 5
A
373 377anti-parallel
Strand 6
A
400 403anti-parallel
Strand 7
A
406 409anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 66first strand
Strand 2
A
116 123parallel
Strand 3
A
138 145parallel
Strand 4
A
173 179parallel
Strand 5
A
204 208parallel
Strand 6
A
255 261parallel
Strand 7
A
278 284parallel
Strand 8
A
309 311parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
31 36first strand
Strand 2
B
19 27anti-parallel
Strand 3
B
3 11anti-parallel
Strand 4
B
49 59parallel
Strand 5
B
373 377anti-parallel
Strand 6
B
400 403anti-parallel
Strand 7
B
406 409anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
61 66first strand
Strand 2
B
116 123parallel
Strand 3
B
138 145parallel
Strand 4
B
173 179parallel
Strand 5
B
204 208parallel
Strand 6
B
255 261parallel
Strand 7
B
278 284parallel
Strand 8
B
309 311parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
31 36first strand
Strand 2
C
19 27anti-parallel
Strand 3
C
3 11anti-parallel
Strand 4
C
48 59parallel
Strand 5
C
373 377anti-parallel
Strand 6
C
400 403anti-parallel
Strand 7
C
406 409anti-parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
61 66first strand
Strand 2
C
116 123parallel
Strand 3
C
138 145parallel
Strand 4
C
173 179parallel
Strand 5
C
204 208parallel
Strand 6
C
255 261parallel
Strand 7
C
278 284parallel
Strand 8
C
309 311parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
31 36first strand
Strand 2
D
19 27anti-parallel
Strand 3
D
3 11anti-parallel
Strand 4
D
48 59parallel
Strand 5
D
373 377anti-parallel
Strand 6
D
400 403anti-parallel
Strand 7
D
406 409anti-parallel
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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
61 66first strand
Strand 2
D
116 123parallel
Strand 3
D
138 145parallel
Strand 4
D
173 179parallel
Strand 5
D
204 208parallel
Strand 6
D
255 261parallel
Strand 7
D
278 284parallel
Strand 8
D
309 311parallel
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