Analysis of interatomic Contacts of Structural Units in PDB entry:
7LKP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7LKP entry

There is 1 chain in PDB entry 7LKP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 3THR 2253
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 79 helices in PDB entry 7LKP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 22Right-handed alpha
Helix 2
AA2
A
23 45Right-handed alpha
Helix 3
AA3
A
62 64Right-handed 310
Helix 4
AA4
A
65 75Right-handed alpha
Helix 5
AA5
A
86 90Right-handed 310
Helix 6
AA6
A
100 113Right-handed alpha
Helix 7
AA7
A
118 137Right-handed alpha
Helix 8
AA8
A
274 290Right-handed alpha
Helix 9
AA9
A
300 306Right-handed alpha
Helix 10
AB1
A
312 324Right-handed alpha
Helix 11
AB2
A
340 344Right-handed 310
Helix 12
AB3
A
345 350Right-handed alpha
Helix 13
AB4
A
367 378Right-handed alpha
Helix 14
AB5
A
384 396Right-handed alpha
Helix 15
AB6
A
404 414Right-handed alpha
Helix 16
AB7
A
415 444Right-handed alpha
Helix 17
AB8
A
446 456Right-handed alpha
Helix 18
AB9
A
461 468Right-handed alpha
Helix 19
AC1
A
480 491Right-handed alpha
Helix 20
AC2
A
498 518Right-handed alpha
Helix 21
AC3
A
530 543Right-handed alpha
Helix 22
AC4
A
607 624Right-handed alpha
Helix 23
AC5
A
646 662Right-handed alpha
Helix 24
AC6
A
664 680Right-handed alpha
Helix 25
AC7
A
681 690Right-handed alpha
Helix 26
AC8
A
693 722Right-handed alpha
Helix 27
AC9
A
729 755Right-handed alpha
Helix 28
AD1
A
758 774Right-handed alpha
Helix 29
AD2
A
774 779Right-handed alpha
Helix 30
AD3
A
787 794Right-handed alpha
Helix 31
AD4
A
797 815Right-handed alpha
Helix 32
AD5
A
835 861Right-handed alpha
Helix 33
AD6
A
970 977Right-handed alpha
Helix 34
AD7
A
999 1004Right-handed alpha
Helix 35
AD8
A
1019 1032Right-handed alpha
Helix 36
AD9
A
1034 1050Right-handed alpha
Helix 37
AE1
A
1051 1055Right-handed 310
Helix 38
AE2
A
1063 1075Right-handed alpha
Helix 39
AE3
A
1076 1080Right-handed 310
Helix 40
AE4
A
1093 1107Right-handed alpha
Helix 41
AE5
A
1120 1126Right-handed alpha
Helix 42
AE6
A
1143 1149Right-handed alpha
Helix 43
AE7
A
1205 1216Right-handed alpha
Helix 44
AE8
A
1239 1253Right-handed alpha
Helix 45
AE9
A
1268 1277Right-handed alpha
Helix 46
AF1
A
1348 1367Right-handed alpha
Helix 47
AF2
A
1369 1390Right-handed alpha
Helix 48
AF3
A
1406 1411Right-handed 310
Helix 49
AF4
A
1424 1436Right-handed alpha
Helix 50
AF5
A
1467 1477Right-handed alpha
Helix 51
AF6
A
1529 1544Right-handed alpha
Helix 52
AF7
A
1572 1587Right-handed alpha
Helix 53
AF8
A
1592 1599Right-handed alpha
Helix 54
AF9
A
1601 1608Right-handed alpha
Helix 55
AG1
A
1625 1641Right-handed alpha
Helix 56
AG2
A
1664 1707Right-handed alpha
Helix 57
AG3
A
1708 1717Right-handed alpha
Helix 58
AG4
A
1719 1749Right-handed alpha
Helix 59
AG5
A
1751 1756Right-handed alpha
Helix 60
AG6
A
1759 1779Right-handed alpha
Helix 61
AG7
A
1780 1785Right-handed alpha
Helix 62
AG8
A
1790 1816Right-handed alpha
Helix 63
AG9
A
1822 1833Right-handed alpha
Helix 64
AH1
A
1836 1862Right-handed alpha
Helix 65
AH2
A
1876 1899Right-handed alpha
Helix 66
AH3
A
1918 1930Right-handed alpha
Helix 67
AH4
A
1977 1987Right-handed alpha
Helix 68
AH5
A
2007 2013Right-handed alpha
Helix 69
AH6
A
2028 2041Right-handed alpha
Helix 70
AH7
A
2043 2045Right-handed 310
Helix 71
AH8
A
2046 2058Right-handed alpha
Helix 72
AH9
A
2072 2085Right-handed alpha
Helix 73
AI1
A
2105 2120Right-handed alpha
Helix 74
AI2
A
2129 2137Right-handed alpha
Helix 75
AI3
A
2153 2161Right-handed alpha
Helix 76
AI4
A
2178 2180Right-handed 310
Helix 77
AI5
A
2181 2193Right-handed alpha
Helix 78
AI6
A
2214 2225Right-handed alpha
Helix 79
AI7
A
2240 2253Right-handed alpha
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There are 11 sheets in PDB entry 7LKP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 50first strand
Strand 2
A
643 644anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 60first strand
Strand 2
A
632 636anti-parallel
Strand 3
A
1615 1619parallel
Strand 4
A
1556 1561anti-parallel
Strand 5
A
1414 1417parallel
Strand 6
A
1521 1522parallel
Strand 7
A
1514 1515anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
525 527first strand
Strand 2
A
398 400parallel
Strand 3
A
549 552parallel
Strand 4
A
566 572anti-parallel
Strand 5
A
1653 1658parallel
Strand 6
A
1403 1404anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
953 954first strand
Strand 2
A
927 932anti-parallel
Strand 3
A
986 989anti-parallel
Strand 4
A
992 993anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1006 1007first strand
Strand 2
A
1083 1084parallel
Strand 3
A
1113 1116parallel
Strand 4
A
959 962parallel
Strand 5
A
1129 1134parallel
Strand 6
A
1137 1142anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1223 1225first strand
Strand 2
A
1228 1230anti-parallel
Strand 3
A
1156 1161anti-parallel
Strand 4
A
1259 1265anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1953 1958first strand
Strand 2
A
1938 1946anti-parallel
Strand 3
A
1961 1962anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1953 1958first strand
Strand 2
A
1938 1946anti-parallel
Strand 3
A
1993 1998anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2014 2016first strand
Strand 2
A
2091 2093parallel
Strand 3
A
2122 2124parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2140 2143first strand
Strand 2
A
2148 2152anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2197 2202first strand
Strand 2
A
2205 2209anti-parallel
Strand 3
A
2166 2171anti-parallel
Strand 4
A
2231 2237anti-parallel
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