Analysis of interatomic Contacts of Structural Units in PDB entry:
7LKZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7LKZ entry

There is 1 chain in PDB entry 7LKZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 3ILE 1937
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 85 helices in PDB entry 7LKZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 21Right-handed alpha
Helix 2
AA2
A
21 36Right-handed alpha
Helix 3
AA3
A
37 46Right-handed alpha
Helix 4
AA4
A
61 65Right-handed 310
Helix 5
AA5
A
66 76Right-handed alpha
Helix 6
AA6
A
77 79Right-handed 310
Helix 7
AA7
A
100 113Right-handed alpha
Helix 8
AA8
A
116 137Right-handed alpha
Helix 9
AA9
A
274 290Right-handed alpha
Helix 10
AB1
A
290 301Right-handed alpha
Helix 11
AB2
A
310 323Right-handed alpha
Helix 12
AB3
A
345 350Right-handed alpha
Helix 13
AB4
A
367 380Right-handed alpha
Helix 14
AB5
A
380 396Right-handed alpha
Helix 15
AB6
A
404 414Right-handed alpha
Helix 16
AB7
A
415 444Right-handed alpha
Helix 17
AB8
A
445 456Right-handed alpha
Helix 18
AB9
A
457 460Right-handed 310
Helix 19
AC1
A
461 468Right-handed alpha
Helix 20
AC2
A
499 519Right-handed alpha
Helix 21
AC3
A
530 543Right-handed alpha
Helix 22
AC4
A
601 606Right-handed alpha
Helix 23
AC5
A
607 623Right-handed alpha
Helix 24
AC6
A
649 654Right-handed alpha
Helix 25
AC7
A
654 662Right-handed alpha
Helix 26
AC8
A
663 680Right-handed alpha
Helix 27
AC9
A
683 688Right-handed alpha
Helix 28
AD1
A
692 722Right-handed alpha
Helix 29
AD2
A
729 753Right-handed alpha
Helix 30
AD3
A
757 762Right-handed alpha
Helix 31
AD4
A
763 772Right-handed alpha
Helix 32
AD5
A
773 783Right-handed alpha
Helix 33
AD6
A
787 795Right-handed alpha
Helix 34
AD7
A
797 814Right-handed alpha
Helix 35
AD8
A
836 859Right-handed alpha
Helix 36
AD9
A
938 942Right-handed 310
Helix 37
AE1
A
968 977Right-handed alpha
Helix 38
AE2
A
998 1003Right-handed alpha
Helix 39
AE3
A
1019 1030Right-handed alpha
Helix 40
AE4
A
1034 1048Right-handed alpha
Helix 41
AE5
A
1051 1055Right-handed 310
Helix 42
AE6
A
1063 1077Right-handed alpha
Helix 43
AE7
A
1095 1107Right-handed alpha
Helix 44
AE8
A
1119 1126Right-handed alpha
Helix 45
AE9
A
1143 1151Right-handed alpha
Helix 46
AF1
A
1204 1216Right-handed alpha
Helix 47
AF2
A
1241 1253Right-handed alpha
Helix 48
AF3
A
1268 1280Right-handed alpha
Helix 49
AF4
A
1347 1369Right-handed alpha
Helix 50
AF5
A
1369 1392Right-handed alpha
Helix 51
AF6
A
1406 1410Right-handed 310
Helix 52
AF7
A
1425 1436Right-handed alpha
Helix 53
AF8
A
1467 1477Right-handed alpha
Helix 54
AF9
A
1529 1547Right-handed alpha
Helix 55
AG1
A
1573 1587Right-handed alpha
Helix 56
AG2
A
1592 1601Right-handed alpha
Helix 57
AG3
A
1602 1608Right-handed alpha
Helix 58
AG4
A
1625 1643Right-handed alpha
Helix 59
AG5
A
1671 1693Right-handed alpha
Helix 60
AG6
A
1694 1697Right-handed 310
Helix 61
AG7
A
1698 1707Right-handed alpha
Helix 62
AG8
A
1708 1716Right-handed alpha
Helix 63
AG9
A
1719 1750Right-handed alpha
Helix 64
AH1
A
1751 1756Right-handed alpha
Helix 65
AH2
A
1759 1779Right-handed alpha
Helix 66
AH3
A
1780 1784Right-handed 310
Helix 67
AH4
A
1789 1817Right-handed alpha
Helix 68
AH5
A
1819 1834Right-handed alpha
Helix 69
AH6
A
1836 1862Right-handed alpha
Helix 70
AH7
A
1875 1899Right-handed alpha
Helix 71
AH8
A
1918 1931Right-handed alpha
Helix 72
AH9
A
1978 1987Right-handed alpha
Helix 73
AI1
A
2007 2013Right-handed alpha
Helix 74
AI2
A
2028 2040Right-handed alpha
Helix 75
AI3
A
2043 2046Right-handed 310
Helix 76
AI4
A
2047 2057Right-handed alpha
Helix 77
AI5
A
2067 2071Right-handed 310
Helix 78
AI6
A
2073 2085Right-handed alpha
Helix 79
AI7
A
2102 2120Right-handed alpha
Helix 80
AI8
A
2129 2136Right-handed alpha
Helix 81
AI9
A
2153 2161Right-handed alpha
Helix 82
AJ1
A
2178 2181Right-handed 310
Helix 83
AJ2
A
2182 2193Right-handed alpha
Helix 84
AJ3
A
2214 2225Right-handed alpha
Helix 85
AJ4
A
2240 2252Right-handed alpha
Back to top of page

There are 11 sheets in PDB entry 7LKZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 59first strand
Strand 2
A
632 636anti-parallel
Strand 3
A
1615 1619parallel
Strand 4
A
1558 1562anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
525 527first strand
Strand 2
A
397 400parallel
Strand 3
A
547 552parallel
Strand 4
A
566 572anti-parallel
Strand 5
A
1653 1657parallel
Strand 6
A
1404 1405anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
946 949first strand
Strand 2
A
927 936anti-parallel
Strand 3
A
952 954anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
946 949first strand
Strand 2
A
927 936anti-parallel
Strand 3
A
984 989anti-parallel
Strand 4
A
992 993anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1005 1008first strand
Strand 2
A
1082 1086parallel
Strand 3
A
1114 1116parallel
Strand 4
A
959 963parallel
Strand 5
A
1129 1134parallel
Strand 6
A
1137 1142anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1220 1223first strand
Strand 2
A
1230 1233anti-parallel
Strand 3
A
1155 1158anti-parallel
Strand 4
A
1264 1266anti-parallel
Strand 5
A
2231 2237anti-parallel
Strand 6
A
2166 2171anti-parallel
Strand 7
A
2205 2210anti-parallel
Strand 8
A
2196 2198anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1413 1416first strand
Strand 2
A
1520 1523parallel
Strand 3
A
1513 1515anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1961 1962first strand
Strand 2
A
1938 1940anti-parallel
Strand 3
A
1996 1998anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1943 1945first strand
Strand 2
A
1955 1958anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2015 2017first strand
Strand 2
A
2092 2095parallel
Strand 3
A
2123 2126parallel
Strand 4
A
1967 1969parallel
Strand 5
A
2139 2140parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2143 2144first strand
Strand 2
A
2147 2148anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il