Analysis of interatomic Contacts of Structural Units in PDB entry:
7LL6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7LL6 entry

There is 1 chain in PDB entry 7LL6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 12GLU 320
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 13 helices in PDB entry 7LL6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
28 39Right-handed alpha
Helix 2
AA2
A
57 69Right-handed alpha
Helix 3
AA3
A
82 89Right-handed alpha
Helix 4
AA4
A
89 112Right-handed alpha
Helix 5
AA5
A
121 125Right-handed 310
Helix 6
AA6
A
134 138Right-handed 310
Helix 7
AA7
A
144 146Right-handed 310
Helix 8
AA8
A
147 169Right-handed alpha
Helix 9
AA9
A
193 209Right-handed alpha
Helix 10
AB1
A
228 242Right-handed alpha
Helix 11
AB2
A
258 270Right-handed alpha
Helix 12
AB3
A
292 298Right-handed alpha
Helix 13
AB4
A
305 320Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 7LL6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 46first strand
Strand 2
A
20 24parallel
Strand 3
A
72 75parallel
Strand 4
A
115 119parallel
Strand 5
A
172 176parallel
Strand 6
A
248 249parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
180 181first strand
Strand 2
A
226 227parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
222 224first strand
Strand 2
A
255 257anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il