Analysis of interatomic Contacts of Structural Units in PDB entry:
7LLD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7LLD entry

There are 2 chains in PDB entry 7LLD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0ASN 445
B
 MET 1ASN 445
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 7LLD. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 14Right-handed alpha
Helix 2
AA2
A
16 21Right-handed alpha
Helix 3
AA3
A
61 75Right-handed alpha
Helix 4
AA4
A
84 98Right-handed alpha
Helix 5
AA5
A
109 126Right-handed alpha
Helix 6
AA6
A
139 146Right-handed alpha
Helix 7
AA7
A
162 174Right-handed alpha
Helix 8
AA8
A
190 204Right-handed alpha
Helix 9
AA9
A
222 227Right-handed alpha
Helix 10
AB1
A
252 257Right-handed alpha
Helix 11
AB2
A
258 263Right-handed alpha
Helix 12
AB3
A
266 271Right-handed 310
Helix 13
AB4
A
272 286Right-handed alpha
Helix 14
AB5
A
289 312Right-handed alpha
Helix 15
AB6
A
333 344Right-handed alpha
Helix 16
AB7
A
362 384Right-handed alpha
Helix 17
AB8
A
396 409Right-handed alpha
Helix 18
AB9
A
415 431Right-handed alpha
Helix 19
AC1
B
2 14Right-handed alpha
Helix 20
AC2
B
16 21Right-handed alpha
Helix 21
AC3
B
61 75Right-handed alpha
Helix 22
AC4
B
84 98Right-handed alpha
Helix 23
AC5
B
109 126Right-handed alpha
Helix 24
AC6
B
139 146Right-handed alpha
Helix 25
AC7
B
162 174Right-handed alpha
Helix 26
AC8
B
190 204Right-handed alpha
Helix 27
AC9
B
222 227Right-handed alpha
Helix 28
AD1
B
252 257Right-handed alpha
Helix 29
AD2
B
258 263Right-handed alpha
Helix 30
AD3
B
266 271Right-handed 310
Helix 31
AD4
B
272 286Right-handed alpha
Helix 32
AD5
B
289 312Right-handed alpha
Helix 33
AD6
B
333 343Right-handed alpha
Helix 34
AD7
B
362 384Right-handed alpha
Helix 35
AD8
B
396 409Right-handed alpha
Helix 36
AD9
B
415 431Right-handed alpha
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There are 6 sheets in PDB entry 7LLD. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 33first strand
Strand 2
A
36 39anti-parallel
Strand 3
A
44 47anti-parallel
Strand 4
A
347 348parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 107first strand
Strand 2
A
247 251anti-parallel
Strand 3
A
233 236anti-parallel
Strand 4
A
208 212parallel
Strand 5
A
177 182parallel
Strand 6
A
129 133parallel
Strand 7
A
156 158parallel
Strand 8
A
149 150anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
317 319first strand
Strand 2
A
325 328anti-parallel
Strand 3
A
354 355anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
29 33first strand
Strand 2
B
36 39anti-parallel
Strand 3
B
44 47anti-parallel
Strand 4
B
347 348parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
103 107first strand
Strand 2
B
247 251anti-parallel
Strand 3
B
233 236anti-parallel
Strand 4
B
208 212parallel
Strand 5
B
177 182parallel
Strand 6
B
129 133parallel
Strand 7
B
156 158parallel
Strand 8
B
149 150anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
317 319first strand
Strand 2
B
325 328anti-parallel
Strand 3
B
354 355anti-parallel
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