Analysis of interatomic Contacts of Structural Units in PDB entry:
7LLI

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7LLI entry

There are 7 chains in PDB entry 7LLI (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	MET 0	VAL 269
D	ILE 1	ASP 98
K	ARG 14	ASP 250
L	ASP 3	SER 214
A	MET 0	VAL 269
B	ILE 1	ASP 98
E	ARG 14	VAL 65

There are 23 helices in PDB entry 7LLI. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	47	54	Right-handed alpha
Helix 2	AA2	C	55	85	Right-handed alpha
Helix 3	AA3	C	133	146	Right-handed alpha
Helix 4	AA4	C	146	160	Right-handed alpha
Helix 5	AA5	C	160	172	Right-handed alpha
Helix 6	AA6	C	172	177	Right-handed alpha
Helix 7	AA7	K	93	97	Right-handed 310
Helix 8	AA8	K	137	145	Right-handed alpha
Helix 9	AA9	K	204	209	Right-handed alpha
Helix 10	AB1	L	86	90	Right-handed 310
Helix 11	AB2	L	103	107	Right-handed 310
Helix 12	AB3	L	193	197	Right-handed 310
Helix 13	AB4	A	47	54	Right-handed alpha
Helix 14	AB5	A	55	85	Right-handed alpha
Helix 15	AB6	A	133	146	Right-handed alpha
Helix 16	AB7	A	146	160	Right-handed alpha
Helix 17	AB8	A	160	172	Right-handed alpha
Helix 18	AB9	A	172	177	Right-handed alpha
Helix 19	AC1	E	93	97	Right-handed 310
Helix 20	AC2	E	137	145	Right-handed alpha
Helix 21	AC3	E	204	209	Right-handed alpha
Helix 22	AC4	F	86	90	Right-handed 310
Helix 23	AC5	F	103	107	Right-handed 310

There are 35 sheets in PDB entry 7LLI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	44	45	first strand
Strand 2	C	31	37	anti-parallel
Strand 3	C	22	28	anti-parallel
Strand 4	C	3	12	anti-parallel
Strand 5	C	91	100	anti-parallel
Strand 6	C	106	114	anti-parallel
Strand 7	C	117	123	anti-parallel
Strand 8	C	128	131	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	183	187	first strand
Strand 2	C	199	205	anti-parallel
Strand 3	C	238	243	anti-parallel
Strand 4	C	226	227	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	183	187	first strand
Strand 2	C	199	205	anti-parallel
Strand 3	C	238	243	anti-parallel
Strand 4	C	231	232	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	219	220	first strand
Strand 2	C	210	216	anti-parallel
Strand 3	C	255	260	anti-parallel
Strand 4	C	263	266	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	6	11	first strand
Strand 2	D	21	30	anti-parallel
Strand 3	D	62	70	anti-parallel
Strand 4	D	50	51	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	6	11	first strand
Strand 2	D	21	30	anti-parallel
Strand 3	D	62	70	anti-parallel
Strand 4	D	55	56	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	44	45	first strand
Strand 2	D	36	41	anti-parallel
Strand 3	D	78	83	anti-parallel
Strand 4	D	91	94	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	16	21	first strand
Strand 2	K	115	120	parallel
Strand 3	K	98	105	anti-parallel
Strand 4	K	39	45	anti-parallel
Strand 5	K	52	58	anti-parallel
Strand 6	K	63	66	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	16	21	first strand
Strand 2	K	115	120	parallel
Strand 3	K	98	105	anti-parallel
Strand 4	K	109	111	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	26	29	first strand
Strand 2	K	86	89	anti-parallel
Strand 3	K	75	77	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	130	134	first strand
Strand 2	K	146	156	anti-parallel
Strand 3	K	194	203	anti-parallel
Strand 4	K	176	178	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	130	134	first strand
Strand 2	K	146	156	anti-parallel
Strand 3	K	194	203	anti-parallel
Strand 4	K	183	184	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	170	171	first strand
Strand 2	K	161	167	anti-parallel
Strand 3	K	213	220	anti-parallel
Strand 4	K	239	246	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	4	6	first strand
Strand 2	L	25	27	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	12	14	first strand
Strand 2	L	115	119	parallel
Strand 3	L	91	99	anti-parallel
Strand 4	L	35	40	anti-parallel
Strand 5	L	46	52	anti-parallel
Strand 6	L	57	59	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	12	14	first strand
Strand 2	L	115	119	parallel
Strand 3	L	91	99	anti-parallel
Strand 4	L	108	111	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	20	22	first strand
Strand 2	L	77	82	anti-parallel
Strand 3	L	67	72	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	129	133	first strand
Strand 2	L	142	147	anti-parallel
Strand 3	L	178	187	anti-parallel
Strand 4	L	163	165	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	129	133	first strand
Strand 2	L	142	147	anti-parallel
Strand 3	L	178	187	anti-parallel
Strand 4	L	169	173	anti-parallel

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There are 8 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	44	45	first strand
Strand 2	A	31	37	anti-parallel
Strand 3	A	22	28	anti-parallel
Strand 4	A	3	12	anti-parallel
Strand 5	A	91	100	anti-parallel
Strand 6	A	106	114	anti-parallel
Strand 7	A	117	123	anti-parallel
Strand 8	A	128	131	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	183	187	first strand
Strand 2	A	198	205	anti-parallel
Strand 3	A	238	244	anti-parallel
Strand 4	A	231	232	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	219	220	first strand
Strand 2	A	210	216	anti-parallel
Strand 3	A	255	260	anti-parallel
Strand 4	A	263	268	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	6	11	first strand
Strand 2	B	21	30	anti-parallel
Strand 3	B	62	70	anti-parallel
Strand 4	B	50	51	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	6	11	first strand
Strand 2	B	21	30	anti-parallel
Strand 3	B	62	70	anti-parallel
Strand 4	B	55	56	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	44	45	first strand
Strand 2	B	35	41	anti-parallel
Strand 3	B	78	84	anti-parallel
Strand 4	B	91	94	anti-parallel

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There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	16	21	first strand
Strand 2	E	115	120	parallel
Strand 3	E	98	105	anti-parallel
Strand 4	E	39	45	anti-parallel
Strand 5	E	52	58	anti-parallel
Strand 6	E	63	66	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	16	21	first strand
Strand 2	E	115	120	parallel
Strand 3	E	98	105	anti-parallel
Strand 4	E	109	111	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	26	29	first strand
Strand 2	E	86	89	anti-parallel
Strand 3	E	75	78	anti-parallel

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There are 8 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	176	178	first strand
Strand 2	E	194	203	anti-parallel
Strand 3	E	146	156	anti-parallel
Strand 4	E	130	135	anti-parallel
Strand 5	F	129	135	anti-parallel
Strand 6	F	142	147	anti-parallel
Strand 7	F	178	187	anti-parallel
Strand 8	F	164	165	anti-parallel

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There are 8 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	183	184	first strand
Strand 2	E	194	203	anti-parallel
Strand 3	E	146	156	anti-parallel
Strand 4	E	130	135	anti-parallel
Strand 5	F	129	135	anti-parallel
Strand 6	F	142	147	anti-parallel
Strand 7	F	178	187	anti-parallel
Strand 8	F	169	173	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	170	172	first strand
Strand 2	E	161	167	anti-parallel
Strand 3	E	213	220	anti-parallel
Strand 4	E	239	246	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	4	6	first strand
Strand 2	F	25	27	anti-parallel

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There are 6 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	12	15	first strand
Strand 2	F	115	120	parallel
Strand 3	F	91	99	anti-parallel
Strand 4	F	35	40	anti-parallel
Strand 5	F	46	52	anti-parallel
Strand 6	F	57	59	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	12	15	first strand
Strand 2	F	115	120	parallel
Strand 3	F	91	99	anti-parallel
Strand 4	F	108	111	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	20	22	first strand
Strand 2	F	77	82	anti-parallel
Strand 3	F	67	72	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7LLI

Analysis of interatomic Contacts of Structural Units in PDB entry:
7LLI