Analysis of interatomic Contacts of Structural Units in PDB entry:
7LM0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7LM0 entry

There are 2 chains in PDB entry 7LM0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 2ASN 450
B
 ASN 5ASN 450
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 7LM0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 19Right-handed alpha
Helix 2
AA2
A
21 26Right-handed alpha
Helix 3
AA3
A
66 80Right-handed alpha
Helix 4
AA4
A
89 103Right-handed alpha
Helix 5
AA5
A
114 131Right-handed alpha
Helix 6
AA6
A
144 151Right-handed alpha
Helix 7
AA7
A
167 179Right-handed alpha
Helix 8
AA8
A
195 209Right-handed alpha
Helix 9
AA9
A
229 233Right-handed 310
Helix 10
AB1
A
257 262Right-handed alpha
Helix 11
AB2
A
263 268Right-handed alpha
Helix 12
AB3
A
277 291Right-handed alpha
Helix 13
AB4
A
294 317Right-handed alpha
Helix 14
AB5
A
336 349Right-handed alpha
Helix 15
AB6
A
367 389Right-handed alpha
Helix 16
AB7
A
401 414Right-handed alpha
Helix 17
AB8
A
420 436Right-handed alpha
Helix 18
AB9
B
7 19Right-handed alpha
Helix 19
AC1
B
21 26Right-handed alpha
Helix 20
AC2
B
66 80Right-handed alpha
Helix 21
AC3
B
89 103Right-handed alpha
Helix 22
AC4
B
114 131Right-handed alpha
Helix 23
AC5
B
144 151Right-handed alpha
Helix 24
AC6
B
167 179Right-handed alpha
Helix 25
AC7
B
195 209Right-handed alpha
Helix 26
AC8
B
227 232Right-handed alpha
Helix 27
AC9
B
257 262Right-handed alpha
Helix 28
AD1
B
263 268Right-handed alpha
Helix 29
AD2
B
277 291Right-handed alpha
Helix 30
AD3
B
294 317Right-handed alpha
Helix 31
AD4
B
336 349Right-handed alpha
Helix 32
AD5
B
367 389Right-handed alpha
Helix 33
AD6
B
401 414Right-handed alpha
Helix 34
AD7
B
420 436Right-handed alpha
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There are 6 sheets in PDB entry 7LM0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 38first strand
Strand 2
A
41 44anti-parallel
Strand 3
A
49 52anti-parallel
Strand 4
A
352 353parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 112first strand
Strand 2
A
252 256anti-parallel
Strand 3
A
238 241anti-parallel
Strand 4
A
213 217parallel
Strand 5
A
182 187parallel
Strand 6
A
134 138parallel
Strand 7
A
161 163parallel
Strand 8
A
154 156anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
322 324first strand
Strand 2
A
330 333anti-parallel
Strand 3
A
359 360anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
34 38first strand
Strand 2
B
41 44anti-parallel
Strand 3
B
49 52anti-parallel
Strand 4
B
352 353parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
108 112first strand
Strand 2
B
252 256anti-parallel
Strand 3
B
238 241anti-parallel
Strand 4
B
213 217parallel
Strand 5
B
182 187parallel
Strand 6
B
134 138parallel
Strand 7
B
161 163parallel
Strand 8
B
154 156anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
322 324first strand
Strand 2
B
330 333anti-parallel
Strand 3
B
359 360anti-parallel
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