Analysis of interatomic Contacts of Structural Units in PDB entry:
7LN1

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7LN1 entry

There are 7 chains in PDB entry 7LN1 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 23	SER 775
B	PRO 23	SER 775
C	PRO 23	SER 775
D	LEU 12	SER 775
E	LEU 12	ARG 766
F	ASN 21	SER 775
G	UNK 1	UNK 9

There are203 helices in PDB entry 7LN1. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	42	50	Right-handed alpha
Helix 2	AA2	A	62	64	Right-handed 310
Helix 3	AA3	A	85	93	Right-handed alpha
Helix 4	AA4	A	119	124	Right-handed alpha
Helix 5	AA5	A	129	134	Right-handed alpha
Helix 6	AA6	A	134	140	Right-handed alpha
Helix 7	AA7	A	190	199	Right-handed alpha
Helix 8	AA8	A	202	206	Right-handed 310
Helix 9	AA9	A	209	226	Right-handed alpha
Helix 10	AB1	A	226	234	Right-handed alpha
Helix 11	AB2	A	250	261	Right-handed alpha
Helix 12	AB3	A	271	277	Right-handed alpha
Helix 13	AB4	A	281	296	Right-handed alpha
Helix 14	AB5	A	305	310	Right-handed alpha
Helix 15	AB6	A	318	335	Right-handed alpha
Helix 16	AB7	A	354	358	Right-handed 310
Helix 17	AB8	A	373	386	Right-handed alpha
Helix 18	AB9	A	395	402	Right-handed alpha
Helix 19	AC1	A	407	426	Right-handed alpha
Helix 20	AC2	A	438	445	Right-handed alpha
Helix 21	AC3	A	448	459	Right-handed alpha
Helix 22	AC4	A	482	499	Right-handed alpha
Helix 23	AC5	A	499	507	Right-handed alpha
Helix 24	AC6	A	523	535	Right-handed alpha
Helix 25	AC7	A	544	549	Right-handed alpha
Helix 26	AC8	A	553	569	Right-handed alpha
Helix 27	AC9	A	578	583	Right-handed alpha
Helix 28	AD1	A	591	612	Right-handed alpha
Helix 29	AD2	A	649	661	Right-handed alpha
Helix 30	AD3	A	671	679	Right-handed alpha
Helix 31	AD4	A	683	714	Right-handed alpha
Helix 32	AD5	A	732	743	Right-handed alpha
Helix 33	AD6	A	748	766	Right-handed alpha
Helix 34	AD7	B	42	50	Right-handed alpha
Helix 35	AD8	B	85	93	Right-handed alpha
Helix 36	AD9	B	119	124	Right-handed alpha
Helix 37	AE1	B	129	134	Right-handed alpha
Helix 38	AE2	B	134	140	Right-handed alpha
Helix 39	AE3	B	190	200	Right-handed alpha
Helix 40	AE4	B	209	226	Right-handed alpha
Helix 41	AE5	B	226	234	Right-handed alpha
Helix 42	AE6	B	250	262	Right-handed alpha
Helix 43	AE7	B	271	275	Right-handed alpha
Helix 44	AE8	B	280	296	Right-handed alpha
Helix 45	AE9	B	305	310	Right-handed alpha
Helix 46	AF1	B	318	334	Right-handed alpha
Helix 47	AF2	B	349	353	Right-handed 310
Helix 48	AF3	B	354	359	Right-handed 310
Helix 49	AF4	B	373	386	Right-handed alpha
Helix 50	AF5	B	395	403	Right-handed alpha
Helix 51	AF6	B	407	426	Right-handed alpha
Helix 52	AF7	B	438	445	Right-handed alpha
Helix 53	AF8	B	448	459	Right-handed alpha
Helix 54	AF9	B	475	479	Right-handed 310
Helix 55	AG1	B	482	499	Right-handed alpha
Helix 56	AG2	B	499	507	Right-handed alpha
Helix 57	AG3	B	523	535	Right-handed alpha
Helix 58	AG4	B	553	569	Right-handed alpha
Helix 59	AG5	B	578	583	Right-handed alpha
Helix 60	AG6	B	595	609	Right-handed alpha
Helix 61	AG7	B	630	635	Right-handed alpha
Helix 62	AG8	B	649	662	Right-handed alpha
Helix 63	AG9	B	671	679	Right-handed alpha
Helix 64	AH1	B	683	714	Right-handed alpha
Helix 65	AH2	B	732	743	Right-handed alpha
Helix 66	AH3	B	748	767	Right-handed alpha
Helix 67	AH4	C	43	49	Right-handed alpha
Helix 68	AH5	C	62	64	Right-handed 310
Helix 69	AH6	C	85	93	Right-handed alpha
Helix 70	AH7	C	119	124	Right-handed alpha
Helix 71	AH8	C	129	134	Right-handed alpha
Helix 72	AH9	C	134	139	Right-handed alpha
Helix 73	AI1	C	190	199	Right-handed alpha
Helix 74	AI2	C	202	206	Right-handed 310
Helix 75	AI3	C	209	226	Right-handed alpha
Helix 76	AI4	C	226	234	Right-handed alpha
Helix 77	AI5	C	250	262	Right-handed alpha
Helix 78	AI6	C	271	275	Right-handed alpha
Helix 79	AI7	C	281	296	Right-handed alpha
Helix 80	AI8	C	305	310	Right-handed alpha
Helix 81	AI9	C	318	333	Right-handed alpha
Helix 82	AJ1	C	354	359	Right-handed 310
Helix 83	AJ2	C	373	386	Right-handed alpha
Helix 84	AJ3	C	395	403	Right-handed alpha
Helix 85	AJ4	C	408	430	Right-handed alpha
Helix 86	AJ5	C	438	445	Right-handed alpha
Helix 87	AJ6	C	448	459	Right-handed alpha
Helix 88	AJ7	C	475	479	Right-handed 310
Helix 89	AJ8	C	482	499	Right-handed alpha
Helix 90	AJ9	C	499	507	Right-handed alpha
Helix 91	AK1	C	523	535	Right-handed alpha
Helix 92	AK2	C	553	569	Right-handed alpha
Helix 93	AK3	C	578	583	Right-handed alpha
Helix 94	AK4	C	595	609	Right-handed alpha
Helix 95	AK5	C	625	629	Right-handed 310
Helix 96	AK6	C	649	661	Right-handed alpha
Helix 97	AK7	C	671	679	Right-handed alpha
Helix 98	AK8	C	683	714	Right-handed alpha
Helix 99	AK9	C	732	742	Right-handed alpha
Helix 100	AL1	C	748	767	Right-handed alpha
Helix 101	AL2	D	14	18	Right-handed 310
Helix 102	AL3	D	43	49	Right-handed alpha
Helix 103	AL4	D	85	93	Right-handed alpha
Helix 104	AL5	D	119	124	Right-handed alpha
Helix 105	AL6	D	129	134	Right-handed alpha
Helix 106	AL7	D	134	139	Right-handed alpha
Helix 107	AL8	D	190	199	Right-handed alpha
Helix 108	AL9	D	202	206	Right-handed 310
Helix 109	AM1	D	209	221	Right-handed alpha
Helix 110	AM2	D	221	226	Right-handed alpha
Helix 111	AM3	D	226	234	Right-handed alpha
Helix 112	AM4	D	250	261	Right-handed alpha
Helix 113	AM5	D	272	275	Right-handed 310
Helix 114	AM6	D	280	296	Right-handed alpha
Helix 115	AM7	D	305	310	Right-handed alpha
Helix 116	AM8	D	318	333	Right-handed alpha
Helix 117	AM9	D	349	353	Right-handed 310
Helix 118	AN1	D	373	386	Right-handed alpha
Helix 119	AN2	D	395	403	Right-handed alpha
Helix 120	AN3	D	408	426	Right-handed alpha
Helix 121	AN4	D	438	445	Right-handed alpha
Helix 122	AN5	D	448	459	Right-handed alpha
Helix 123	AN6	D	461	465	Right-handed 310
Helix 124	AN7	D	482	499	Right-handed alpha
Helix 125	AN8	D	499	507	Right-handed alpha
Helix 126	AN9	D	524	535	Right-handed alpha
Helix 127	AO1	D	543	547	Right-handed 310
Helix 128	AO2	D	553	569	Right-handed alpha
Helix 129	AO3	D	578	583	Right-handed alpha
Helix 130	AO4	D	591	609	Right-handed alpha
Helix 131	AO5	D	630	635	Right-handed alpha
Helix 132	AO6	D	649	661	Right-handed alpha
Helix 133	AO7	D	671	679	Right-handed alpha
Helix 134	AO8	D	683	714	Right-handed alpha
Helix 135	AO9	D	732	743	Right-handed alpha
Helix 136	AP1	D	748	767	Right-handed alpha
Helix 137	AP2	E	42	49	Right-handed alpha
Helix 138	AP3	E	61	65	Right-handed 310
Helix 139	AP4	E	85	93	Right-handed alpha
Helix 140	AP5	E	129	134	Right-handed alpha
Helix 141	AP6	E	134	139	Right-handed alpha
Helix 142	AP7	E	190	199	Right-handed alpha
Helix 143	AP8	E	202	206	Right-handed 310
Helix 144	AP9	E	209	220	Right-handed alpha
Helix 145	AQ1	E	220	226	Right-handed alpha
Helix 146	AQ2	E	226	234	Right-handed alpha
Helix 147	AQ3	E	250	261	Right-handed alpha
Helix 148	AQ4	E	272	275	Right-handed 310
Helix 149	AQ5	E	281	296	Right-handed alpha
Helix 150	AQ6	E	305	310	Right-handed alpha
Helix 151	AQ7	E	318	338	Right-handed alpha
Helix 152	AQ8	E	349	353	Right-handed 310
Helix 153	AQ9	E	354	359	Right-handed 310
Helix 154	AR1	E	373	385	Right-handed alpha
Helix 155	AR2	E	395	403	Right-handed alpha
Helix 156	AR3	E	408	425	Right-handed alpha
Helix 157	AR4	E	438	445	Right-handed alpha
Helix 158	AR5	E	448	459	Right-handed alpha
Helix 159	AR6	E	462	466	Right-handed 310
Helix 160	AR7	E	482	499	Right-handed alpha
Helix 161	AR8	E	499	506	Right-handed alpha
Helix 162	AR9	E	523	535	Right-handed alpha
Helix 163	AS1	E	553	569	Right-handed alpha
Helix 164	AS2	E	595	611	Right-handed alpha
Helix 165	AS3	E	630	635	Right-handed alpha
Helix 166	AS4	E	649	661	Right-handed alpha
Helix 167	AS5	E	671	679	Right-handed alpha
Helix 168	AS6	E	683	714	Right-handed alpha
Helix 169	AS7	E	732	741	Right-handed alpha
Helix 170	AS8	E	748	766	Right-handed alpha
Helix 171	AS9	F	42	50	Right-handed alpha
Helix 172	AT1	F	85	93	Right-handed alpha
Helix 173	AT2	F	129	134	Right-handed alpha
Helix 174	AT3	F	190	199	Right-handed alpha
Helix 175	AT4	F	202	206	Right-handed 310
Helix 176	AT5	F	209	220	Right-handed alpha
Helix 177	AT6	F	220	226	Right-handed alpha
Helix 178	AT7	F	226	234	Right-handed alpha
Helix 179	AT8	F	250	262	Right-handed alpha
Helix 180	AT9	F	271	277	Right-handed alpha
Helix 181	AU1	F	280	296	Right-handed alpha
Helix 182	AU2	F	305	310	Right-handed alpha
Helix 183	AU3	F	318	335	Right-handed alpha
Helix 184	AU4	F	354	359	Right-handed alpha
Helix 185	AU5	F	373	385	Right-handed alpha
Helix 186	AU6	F	395	403	Right-handed alpha
Helix 187	AU7	F	408	426	Right-handed alpha
Helix 188	AU8	F	438	445	Right-handed alpha
Helix 189	AU9	F	448	459	Right-handed alpha
Helix 190	AV1	F	475	479	Right-handed 310
Helix 191	AV2	F	482	499	Right-handed alpha
Helix 192	AV3	F	499	506	Right-handed alpha
Helix 193	AV4	F	523	536	Right-handed alpha
Helix 194	AV5	F	559	569	Right-handed alpha
Helix 195	AV6	F	578	583	Right-handed alpha
Helix 196	AV7	F	598	612	Right-handed alpha
Helix 197	AV8	F	625	629	Right-handed 310
Helix 198	AV9	F	630	635	Right-handed alpha
Helix 199	AW1	F	649	662	Right-handed alpha
Helix 200	AW2	F	671	679	Right-handed alpha
Helix 201	AW3	F	683	714	Right-handed alpha
Helix 202	AW4	F	732	743	Right-handed alpha
Helix 203	AW5	F	748	762	Right-handed alpha

There are 29 sheets in PDB entry 7LN1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	65	70	first strand
Strand 2	A	56	61	anti-parallel
Strand 3	A	99	104	anti-parallel
Strand 4	A	25	29	anti-parallel
Strand 5	A	81	83	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	145	146	first strand
Strand 2	A	174	183	anti-parallel
Strand 3	A	109	118	parallel
Strand 4	A	161	169	anti-parallel
Strand 5	A	150	154	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	265	270	first strand
Strand 2	A	299	304	parallel
Strand 3	A	341	347	parallel
Strand 4	A	240	244	parallel
Strand 5	A	365	368	parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	538	543	first strand
Strand 2	A	572	577	parallel
Strand 3	A	618	623	parallel
Strand 4	A	513	517	parallel
Strand 5	A	641	644	parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	25	30	first strand
Strand 2	B	81	84	parallel
Strand 3	B	38	41	anti-parallel
Strand 4	B	66	73	parallel
Strand 5	B	56	60	anti-parallel
Strand 6	B	99	104	anti-parallel
Strand 7	B	25	30	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	150	154	first strand
Strand 2	B	161	169	anti-parallel
Strand 3	B	113	118	anti-parallel
Strand 4	B	181	183	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	145	146	first strand
Strand 2	B	174	175	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	265	270	first strand
Strand 2	B	299	304	parallel
Strand 3	B	341	347	parallel
Strand 4	B	240	244	parallel
Strand 5	B	365	368	parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	538	542	first strand
Strand 2	B	572	577	parallel
Strand 3	B	617	623	parallel
Strand 4	B	513	517	parallel
Strand 5	B	641	644	parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	25	30	first strand
Strand 2	C	81	84	parallel
Strand 3	C	38	42	anti-parallel
Strand 4	C	66	74	parallel
Strand 5	C	56	60	anti-parallel
Strand 6	C	99	104	anti-parallel
Strand 7	C	25	30	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	151	154	first strand
Strand 2	C	161	168	anti-parallel
Strand 3	C	113	118	anti-parallel
Strand 4	C	181	183	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	145	147	first strand
Strand 2	C	173	175	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	265	270	first strand
Strand 2	C	299	304	parallel
Strand 3	C	342	347	parallel
Strand 4	C	240	244	parallel
Strand 5	C	365	368	parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	538	542	first strand
Strand 2	C	572	576	parallel
Strand 3	C	617	623	parallel
Strand 4	C	513	517	parallel
Strand 5	C	641	644	parallel

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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	26	29	first strand
Strand 2	D	81	83	parallel
Strand 3	D	38	42	anti-parallel
Strand 4	D	65	74	parallel
Strand 5	D	56	61	anti-parallel
Strand 6	D	99	104	anti-parallel
Strand 7	D	26	29	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	150	154	first strand
Strand 2	D	161	169	anti-parallel
Strand 3	D	113	118	anti-parallel
Strand 4	D	181	183	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	145	147	first strand
Strand 2	D	173	175	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	265	270	first strand
Strand 2	D	299	304	parallel
Strand 3	D	341	347	parallel
Strand 4	D	240	244	parallel
Strand 5	D	365	368	parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	538	542	first strand
Strand 2	D	572	576	parallel
Strand 3	D	617	623	parallel
Strand 4	D	513	517	parallel
Strand 5	D	641	644	parallel

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There are 7 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	25	30	first strand
Strand 2	E	81	84	parallel
Strand 3	E	38	41	anti-parallel
Strand 4	E	67	73	parallel
Strand 5	E	56	59	anti-parallel
Strand 6	E	99	104	anti-parallel
Strand 7	E	25	30	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	151	154	first strand
Strand 2	E	161	169	anti-parallel
Strand 3	E	113	118	anti-parallel
Strand 4	E	181	183	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	145	146	first strand
Strand 2	E	174	175	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	265	270	first strand
Strand 2	E	299	304	parallel
Strand 3	E	341	347	parallel
Strand 4	E	240	244	parallel
Strand 5	E	365	368	parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	538	542	first strand
Strand 2	E	572	577	parallel
Strand 3	E	617	623	parallel
Strand 4	E	513	517	parallel
Strand 5	E	641	644	parallel

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There are 7 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	26	29	first strand
Strand 2	F	81	83	parallel
Strand 3	F	38	41	anti-parallel
Strand 4	F	65	73	parallel
Strand 5	F	55	61	anti-parallel
Strand 6	F	99	104	anti-parallel
Strand 7	F	26	29	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	151	154	first strand
Strand 2	F	161	168	anti-parallel
Strand 3	F	113	118	anti-parallel
Strand 4	F	181	183	parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	145	147	first strand
Strand 2	F	173	175	anti-parallel

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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	266	270	first strand
Strand 2	F	300	304	parallel
Strand 3	F	342	347	parallel
Strand 4	F	240	244	parallel
Strand 5	F	365	368	parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	538	542	first strand
Strand 2	F	572	576	parallel
Strand 3	F	618	623	parallel
Strand 4	F	513	517	parallel
Strand 5	F	641	644	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7LN1

Analysis of interatomic Contacts of Structural Units in PDB entry:
7LN1