Analysis of interatomic Contacts of Structural Units in PDB entry:
7LO1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7LO1 entry

There are 2 chains in PDB entry 7LO1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 10VAL 437
B
 PRO 10VAL 437
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 7LO1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 32Right-handed alpha
Helix 2
AA2
A
56 67Right-handed alpha
Helix 3
AA3
A
67 78Right-handed alpha
Helix 4
AA4
A
96 102Right-handed alpha
Helix 5
AA5
A
102 106Right-handed alpha
Helix 6
AA6
A
123 132Right-handed alpha
Helix 7
AA7
A
179 187Right-handed alpha
Helix 8
AA8
A
190 194Right-handed 310
Helix 9
AA9
A
209 217Right-handed alpha
Helix 10
AB1
A
217 222Right-handed alpha
Helix 11
AB2
A
269 276Right-handed alpha
Helix 12
AB3
A
280 289Right-handed alpha
Helix 13
AB4
A
319 324Right-handed alpha
Helix 14
AB5
A
332 352Right-handed alpha
Helix 15
AB6
A
360 393Right-handed alpha
Helix 16
AB7
A
402 419Right-handed alpha
Helix 17
AB8
A
421 437Right-handed alpha
Helix 18
AB9
B
19 32Right-handed alpha
Helix 19
AC1
B
56 67Right-handed alpha
Helix 20
AC2
B
67 78Right-handed alpha
Helix 21
AC3
B
96 102Right-handed alpha
Helix 22
AC4
B
102 106Right-handed alpha
Helix 23
AC5
B
123 132Right-handed alpha
Helix 24
AC6
B
179 187Right-handed alpha
Helix 25
AC7
B
209 217Right-handed alpha
Helix 26
AC8
B
217 222Right-handed alpha
Helix 27
AC9
B
269 276Right-handed alpha
Helix 28
AD1
B
280 289Right-handed alpha
Helix 29
AD2
B
319 324Right-handed alpha
Helix 30
AD3
B
332 352Right-handed alpha
Helix 31
AD4
B
360 393Right-handed alpha
Helix 32
AD5
B
402 419Right-handed alpha
Helix 33
AD6
B
421 437Right-handed alpha
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There are 8 sheets in PDB entry 7LO1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 140first strand
Strand 2
A
36 40parallel
Strand 3
A
12 16parallel
Strand 4
A
170 173parallel
Strand 5
A
315 317parallel
Strand 6
A
311 312anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 55first strand
Strand 2
A
119 122anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
107 112first strand
Strand 2
A
85 90anti-parallel
Strand 3
A
225 229parallel
Strand 4
A
232 239anti-parallel
Strand 5
A
244 252anti-parallel
Strand 6
A
196 208anti-parallel
Strand 7
A
293 301anti-parallel
Strand 8
A
264 268anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 149first strand
Strand 2
A
156 160anti-parallel
Strand 3
A
165 168anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
139 140first strand
Strand 2
B
36 40parallel
Strand 3
B
12 16parallel
Strand 4
B
170 173parallel
Strand 5
B
315 317parallel
Strand 6
B
311 312anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
52 55first strand
Strand 2
B
119 122anti-parallel
Strand 3
B
79 80anti-parallel
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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
107 112first strand
Strand 2
B
85 90anti-parallel
Strand 3
B
225 229parallel
Strand 4
B
232 239anti-parallel
Strand 5
B
244 252anti-parallel
Strand 6
B
196 208anti-parallel
Strand 7
B
293 301anti-parallel
Strand 8
B
264 268anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
145 149first strand
Strand 2
B
156 160anti-parallel
Strand 3
B
165 168anti-parallel
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