Analysis of interatomic Contacts of Structural Units in PDB entry:
7LO5

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7LO5 entry

There are 12 chains in PDB entry 7LO5 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 2	MET 1029
B	SER 2	MET 1029
C	MET 1	MET 1029
D	MET 1	MET 1029
E	C 1	C 28
F	G 2	G 28
G	C 1	C 28
H	G 2	G 28
I	C 1	C 28
J	G 2	G 28
K	C 1	A 25
L	T 4	G 28

There are179 helices in PDB entry 7LO5. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	2	20	Right-handed alpha
Helix 2	AA2	A	24	29	Right-handed alpha
Helix 3	AA3	A	29	43	Right-handed alpha
Helix 4	AA4	A	86	97	Right-handed alpha
Helix 5	AA5	A	128	140	Right-handed alpha
Helix 6	AA6	A	144	175	Right-handed alpha
Helix 7	AA7	A	178	193	Right-handed alpha
Helix 8	AA8	A	201	222	Right-handed alpha
Helix 9	AA9	A	226	232	Right-handed alpha
Helix 10	AB1	A	232	243	Right-handed alpha
Helix 11	AB2	A	247	270	Right-handed alpha
Helix 12	AB3	A	274	293	Right-handed alpha
Helix 13	AB4	A	294	302	Right-handed alpha
Helix 14	AB5	A	307	327	Right-handed alpha
Helix 15	AB6	A	345	355	Right-handed alpha
Helix 16	AB7	A	356	367	Right-handed alpha
Helix 17	AB8	A	374	394	Right-handed alpha
Helix 18	AB9	A	427	440	Right-handed alpha
Helix 19	AC1	A	457	461	Right-handed 310
Helix 20	AC2	A	467	477	Right-handed alpha
Helix 21	AC3	A	477	482	Right-handed alpha
Helix 22	AC4	A	491	504	Right-handed alpha
Helix 23	AC5	A	521	523	Right-handed 310
Helix 24	AC6	A	524	535	Right-handed alpha
Helix 25	AC7	A	550	558	Right-handed alpha
Helix 26	AC8	A	600	611	Right-handed alpha
Helix 27	AC9	A	612	616	Right-handed 310
Helix 28	AD1	A	646	651	Right-handed alpha
Helix 29	AD2	A	674	678	Right-handed alpha
Helix 30	AD3	A	682	701	Right-handed alpha
Helix 31	AD4	A	704	710	Right-handed alpha
Helix 32	AD5	A	720	729	Right-handed alpha
Helix 33	AD6	A	736	738	Right-handed 310
Helix 34	AD7	A	765	770	Right-handed alpha
Helix 35	AD8	A	827	838	Right-handed alpha
Helix 36	AD9	A	844	858	Right-handed alpha
Helix 37	AE1	A	858	865	Right-handed alpha
Helix 38	AE2	A	865	870	Right-handed alpha
Helix 39	AE3	A	882	898	Right-handed alpha
Helix 40	AE4	A	918	926	Right-handed alpha
Helix 41	AE5	A	956	962	Right-handed 310
Helix 42	AE6	A	968	976	Right-handed alpha
Helix 43	AE7	A	984	991	Right-handed alpha
Helix 44	AE8	A	995	1023	Right-handed alpha
Helix 45	AE9	B	3	20	Right-handed alpha
Helix 46	AF1	B	24	29	Right-handed alpha
Helix 47	AF2	B	29	42	Right-handed alpha
Helix 48	AF3	B	86	97	Right-handed alpha
Helix 49	AF4	B	128	141	Right-handed alpha
Helix 50	AF5	B	144	175	Right-handed alpha
Helix 51	AF6	B	178	196	Right-handed alpha
Helix 52	AF7	B	201	222	Right-handed alpha
Helix 53	AF8	B	226	232	Right-handed alpha
Helix 54	AF9	B	232	244	Right-handed alpha
Helix 55	AG1	B	248	270	Right-handed alpha
Helix 56	AG2	B	274	293	Right-handed alpha
Helix 57	AG3	B	294	302	Right-handed alpha
Helix 58	AG4	B	307	326	Right-handed alpha
Helix 59	AG5	B	345	355	Right-handed alpha
Helix 60	AG6	B	356	367	Right-handed alpha
Helix 61	AG7	B	374	394	Right-handed alpha
Helix 62	AG8	B	427	438	Right-handed alpha
Helix 63	AG9	B	457	461	Right-handed 310
Helix 64	AH1	B	467	477	Right-handed alpha
Helix 65	AH2	B	478	482	Right-handed 310
Helix 66	AH3	B	491	504	Right-handed alpha
Helix 67	AH4	B	521	525	Right-handed 310
Helix 68	AH5	B	526	535	Right-handed alpha
Helix 69	AH6	B	551	558	Right-handed alpha
Helix 70	AH7	B	600	611	Right-handed alpha
Helix 71	AH8	B	646	652	Right-handed alpha
Helix 72	AH9	B	674	678	Right-handed alpha
Helix 73	AI1	B	682	701	Right-handed alpha
Helix 74	AI2	B	704	710	Right-handed alpha
Helix 75	AI3	B	720	729	Right-handed alpha
Helix 76	AI4	B	736	738	Right-handed 310
Helix 77	AI5	B	765	769	Right-handed 310
Helix 78	AI6	B	827	838	Right-handed alpha
Helix 79	AI7	B	844	856	Right-handed alpha
Helix 80	AI8	B	858	865	Right-handed alpha
Helix 81	AI9	B	865	872	Right-handed alpha
Helix 82	AJ1	B	882	898	Right-handed alpha
Helix 83	AJ2	B	918	924	Right-handed alpha
Helix 84	AJ3	B	957	961	Right-handed 310
Helix 85	AJ4	B	969	976	Right-handed alpha
Helix 86	AJ5	B	984	991	Right-handed alpha
Helix 87	AJ6	B	995	1023	Right-handed alpha
Helix 88	AJ7	C	2	20	Right-handed alpha
Helix 89	AJ8	C	24	29	Right-handed alpha
Helix 90	AJ9	C	29	43	Right-handed alpha
Helix 91	AK1	C	86	98	Right-handed alpha
Helix 92	AK2	C	128	142	Right-handed alpha
Helix 93	AK3	C	144	159	Right-handed alpha
Helix 94	AK4	C	160	174	Right-handed alpha
Helix 95	AK5	C	178	196	Right-handed alpha
Helix 96	AK6	C	201	222	Right-handed alpha
Helix 97	AK7	C	226	232	Right-handed alpha
Helix 98	AK8	C	232	244	Right-handed alpha
Helix 99	AK9	C	247	259	Right-handed alpha
Helix 100	AL1	C	260	270	Right-handed alpha
Helix 101	AL2	C	274	290	Right-handed alpha
Helix 102	AL3	C	296	302	Right-handed alpha
Helix 103	AL4	C	307	326	Right-handed alpha
Helix 104	AL5	C	345	355	Right-handed alpha
Helix 105	AL6	C	359	367	Right-handed alpha
Helix 106	AL7	C	374	394	Right-handed alpha
Helix 107	AL8	C	406	411	Right-handed alpha
Helix 108	AL9	C	427	439	Right-handed alpha
Helix 109	AM1	C	457	461	Right-handed 310
Helix 110	AM2	C	467	477	Right-handed alpha
Helix 111	AM3	C	477	482	Right-handed alpha
Helix 112	AM4	C	491	504	Right-handed alpha
Helix 113	AM5	C	516	521	Right-handed alpha
Helix 114	AM6	C	524	535	Right-handed alpha
Helix 115	AM7	C	550	558	Right-handed alpha
Helix 116	AM8	C	600	610	Right-handed alpha
Helix 117	AM9	C	611	616	Right-handed 310
Helix 118	AN1	C	646	652	Right-handed alpha
Helix 119	AN2	C	674	678	Right-handed alpha
Helix 120	AN3	C	683	702	Right-handed alpha
Helix 121	AN4	C	704	710	Right-handed alpha
Helix 122	AN5	C	720	729	Right-handed alpha
Helix 123	AN6	C	765	770	Right-handed alpha
Helix 124	AN7	C	771	774	Right-handed 310
Helix 125	AN8	C	827	838	Right-handed alpha
Helix 126	AN9	C	844	857	Right-handed alpha
Helix 127	AO1	C	858	865	Right-handed alpha
Helix 128	AO2	C	865	870	Right-handed alpha
Helix 129	AO3	C	881	898	Right-handed alpha
Helix 130	AO4	C	918	925	Right-handed alpha
Helix 131	AO5	C	956	961	Right-handed 310
Helix 132	AO6	C	969	977	Right-handed alpha
Helix 133	AO7	C	984	991	Right-handed alpha
Helix 134	AO8	C	995	1023	Right-handed alpha
Helix 135	AO9	D	2	21	Right-handed alpha
Helix 136	AP1	D	24	29	Right-handed alpha
Helix 137	AP2	D	29	44	Right-handed alpha
Helix 138	AP3	D	86	96	Right-handed alpha
Helix 139	AP4	D	128	142	Right-handed alpha
Helix 140	AP5	D	144	175	Right-handed alpha
Helix 141	AP6	D	178	193	Right-handed alpha
Helix 142	AP7	D	201	219	Right-handed alpha
Helix 143	AP8	D	225	231	Right-handed 310
Helix 144	AP9	D	232	246	Right-handed alpha
Helix 145	AQ1	D	247	259	Right-handed alpha
Helix 146	AQ2	D	260	270	Right-handed alpha
Helix 147	AQ3	D	274	292	Right-handed alpha
Helix 148	AQ4	D	294	302	Right-handed alpha
Helix 149	AQ5	D	307	325	Right-handed alpha
Helix 150	AQ6	D	348	355	Right-handed alpha
Helix 151	AQ7	D	356	367	Right-handed alpha
Helix 152	AQ8	D	374	393	Right-handed alpha
Helix 153	AQ9	D	427	440	Right-handed alpha
Helix 154	AR1	D	470	477	Right-handed alpha
Helix 155	AR2	D	477	482	Right-handed alpha
Helix 156	AR3	D	491	504	Right-handed alpha
Helix 157	AR4	D	517	520	Right-handed 310
Helix 158	AR5	D	524	531	Right-handed alpha
Helix 159	AR6	D	532	534	Right-handed 310
Helix 160	AR7	D	551	558	Right-handed alpha
Helix 161	AR8	D	600	611	Right-handed alpha
Helix 162	AR9	D	612	616	Right-handed 310
Helix 163	AS1	D	646	651	Right-handed alpha
Helix 164	AS2	D	674	678	Right-handed alpha
Helix 165	AS3	D	682	701	Right-handed alpha
Helix 166	AS4	D	704	710	Right-handed alpha
Helix 167	AS5	D	720	729	Right-handed alpha
Helix 168	AS6	D	770	774	Right-handed 310
Helix 169	AS7	D	827	838	Right-handed alpha
Helix 170	AS8	D	844	857	Right-handed alpha
Helix 171	AS9	D	858	865	Right-handed alpha
Helix 172	AT1	D	865	870	Right-handed alpha
Helix 173	AT2	D	882	898	Right-handed alpha
Helix 174	AT3	D	899	902	Right-handed 310
Helix 175	AT4	D	918	925	Right-handed alpha
Helix 176	AT5	D	956	962	Right-handed alpha
Helix 177	AT6	D	968	978	Right-handed alpha
Helix 178	AT7	D	984	989	Right-handed alpha
Helix 179	AT8	D	999	1023	Right-handed alpha

There are 33 sheets in PDB entry 7LO5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	46	48	first strand
Strand 2	A	65	68	anti-parallel
Strand 3	A	74	81	anti-parallel
Strand 4	A	103	108	parallel
Strand 5	A	111	116	anti-parallel
Strand 6	A	119	125	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	53	54	first strand
Strand 2	A	60	61	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	402	404	first strand
Strand 2	A	368	372	parallel
Strand 3	A	336	339	parallel
Strand 4	A	442	445	parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	508	515	first strand
Strand 2	A	570	577	anti-parallel
Strand 3	A	537	542	anti-parallel
Strand 4	A	589	594	parallel
Strand 5	A	619	621	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	667	668	first strand
Strand 2	A	809	812	anti-parallel
Strand 3	A	779	782	anti-parallel
Strand 4	A	793	796	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	679	680	first strand
Strand 2	A	750	754	anti-parallel
Strand 3	A	740	744	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	814	816	first strand
Strand 2	A	822	824	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	908	911	first strand
Strand 2	A	950	953	anti-parallel
Strand 3	A	940	947	anti-parallel
Strand 4	A	928	934	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	46	49	first strand
Strand 2	B	65	68	anti-parallel
Strand 3	B	74	80	anti-parallel
Strand 4	B	103	107	parallel
Strand 5	B	111	116	anti-parallel
Strand 6	B	119	125	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	53	54	first strand
Strand 2	B	60	61	anti-parallel

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There are 9 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	402	404	first strand
Strand 2	B	368	372	parallel
Strand 3	B	336	339	parallel
Strand 4	B	442	447	parallel
Strand 5	B	508	515	parallel
Strand 6	B	570	577	anti-parallel
Strand 7	B	537	542	anti-parallel
Strand 8	B	589	594	parallel
Strand 9	B	619	621	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	667	668	first strand
Strand 2	B	809	812	anti-parallel
Strand 3	B	779	782	anti-parallel
Strand 4	B	793	796	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	679	680	first strand
Strand 2	B	750	754	anti-parallel
Strand 3	B	740	744	anti-parallel
Strand 4	B	799	800	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	814	816	first strand
Strand 2	B	822	824	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	908	911	first strand
Strand 2	B	950	953	anti-parallel
Strand 3	B	940	945	anti-parallel
Strand 4	B	931	934	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	963	964	first strand
Strand 2	B	967	968	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	46	49	first strand
Strand 2	C	65	68	anti-parallel
Strand 3	C	74	80	anti-parallel
Strand 4	C	103	107	parallel
Strand 5	C	111	116	anti-parallel
Strand 6	C	119	125	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	53	54	first strand
Strand 2	C	60	61	anti-parallel

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There are 9 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	402	403	first strand
Strand 2	C	368	371	parallel
Strand 3	C	336	339	parallel
Strand 4	C	442	447	parallel
Strand 5	C	508	515	parallel
Strand 6	C	570	577	anti-parallel
Strand 7	C	537	542	anti-parallel
Strand 8	C	589	594	parallel
Strand 9	C	619	621	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	667	668	first strand
Strand 2	C	809	811	anti-parallel
Strand 3	C	779	782	anti-parallel
Strand 4	C	793	796	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	679	680	first strand
Strand 2	C	749	754	anti-parallel
Strand 3	C	740	746	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	814	815	first strand
Strand 2	C	823	824	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	928	935	first strand
Strand 2	C	939	947	anti-parallel
Strand 3	C	952	953	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	963	964	first strand
Strand 2	C	967	968	anti-parallel

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There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	46	49	first strand
Strand 2	D	65	68	anti-parallel
Strand 3	D	74	80	anti-parallel
Strand 4	D	103	107	parallel
Strand 5	D	111	116	anti-parallel
Strand 6	D	119	125	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	53	54	first strand
Strand 2	D	60	61	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	402	404	first strand
Strand 2	D	368	372	parallel
Strand 3	D	336	339	parallel
Strand 4	D	442	445	parallel

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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	508	515	first strand
Strand 2	D	570	577	anti-parallel
Strand 3	D	537	542	anti-parallel
Strand 4	D	589	592	parallel
Strand 5	D	619	621	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	667	668	first strand
Strand 2	D	809	810	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	679	680	first strand
Strand 2	D	749	753	anti-parallel
Strand 3	D	741	746	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	779	782	first strand
Strand 2	D	793	796	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	814	816	first strand
Strand 2	D	822	824	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	909	910	first strand
Strand 2	D	951	952	anti-parallel
Strand 3	D	939	945	anti-parallel
Strand 4	D	931	935	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7LO5

Analysis of interatomic Contacts of Structural Units in PDB entry:
7LO5