Analysis of interatomic Contacts of Structural Units in PDB entry:
7LOX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7LOX entry

There are 3 chains in PDB entry 7LOX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 15LYS 304
B
 ALA 16GLY 305
C
 ASN 15LYS 304
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 7LOX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 22Right-handed 310
Helix 2
AA2
A
51 53Right-handed 310
Helix 3
AA3
A
54 63Right-handed alpha
Helix 4
AA4
A
63 68Right-handed alpha
Helix 5
AA5
A
78 83Right-handed alpha
Helix 6
AA6
A
97 115Right-handed alpha
Helix 7
AA7
A
125 127Right-handed 310
Helix 8
AA8
A
128 141Right-handed alpha
Helix 9
AA9
A
162 164Right-handed 310
Helix 10
AB1
A
165 173Right-handed alpha
Helix 11
AB2
A
177 180Right-handed 310
Helix 12
AB3
A
201 205Right-handed alpha
Helix 13
AB4
A
208 221Right-handed alpha
Helix 14
AB5
A
232 234Right-handed 310
Helix 15
AB6
A
251 261Right-handed alpha
Helix 16
AB7
A
276 280Right-handed 310
Helix 17
AB8
A
283 302Right-handed alpha
Helix 18
AB9
B
18 22Right-handed 310
Helix 19
AC1
B
51 53Right-handed 310
Helix 20
AC2
B
54 63Right-handed alpha
Helix 21
AC3
B
63 68Right-handed alpha
Helix 22
AC4
B
78 82Right-handed 310
Helix 23
AC5
B
97 115Right-handed alpha
Helix 24
AC6
B
125 127Right-handed 310
Helix 25
AC7
B
128 141Right-handed alpha
Helix 26
AC8
B
165 173Right-handed alpha
Helix 27
AC9
B
177 180Right-handed 310
Helix 28
AD1
B
200 205Right-handed alpha
Helix 29
AD2
B
208 221Right-handed alpha
Helix 30
AD3
B
232 234Right-handed 310
Helix 31
AD4
B
251 261Right-handed alpha
Helix 32
AD5
B
276 280Right-handed 310
Helix 33
AD6
B
283 303Right-handed alpha
Helix 34
AD7
C
18 22Right-handed 310
Helix 35
AD8
C
51 53Right-handed 310
Helix 36
AD9
C
54 63Right-handed alpha
Helix 37
AE1
C
63 68Right-handed alpha
Helix 38
AE2
C
78 83Right-handed alpha
Helix 39
AE3
C
97 115Right-handed alpha
Helix 40
AE4
C
125 127Right-handed 310
Helix 41
AE5
C
128 141Right-handed alpha
Helix 42
AE6
C
165 173Right-handed alpha
Helix 43
AE7
C
177 180Right-handed 310
Helix 44
AE8
C
201 207Right-handed alpha
Helix 45
AE9
C
208 221Right-handed alpha
Helix 46
AF1
C
232 234Right-handed 310
Helix 47
AF2
C
251 262Right-handed alpha
Helix 48
AF3
C
276 280Right-handed 310
Helix 49
AF4
C
283 303Right-handed alpha
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There are 3 sheets in PDB entry 7LOX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 90first strand
Strand 2
A
35 40parallel
Strand 3
A
118 123parallel
Strand 4
A
266 273parallel
Strand 5
A
224 230parallel
Strand 6
A
144 148parallel
Strand 7
A
182 186parallel
Strand 8
A
197 200parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
85 90first strand
Strand 2
B
35 40parallel
Strand 3
B
118 123parallel
Strand 4
B
267 273parallel
Strand 5
B
225 230parallel
Strand 6
B
144 148parallel
Strand 7
B
182 184parallel
Strand 8
B
197 199parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
85 90first strand
Strand 2
C
35 40parallel
Strand 3
C
118 123parallel
Strand 4
C
266 273parallel
Strand 5
C
224 230parallel
Strand 6
C
144 148parallel
Strand 7
C
182 186parallel
Strand 8
C
197 200parallel
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