Analysis of interatomic Contacts of Structural Units in PDB entry:
7LP9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7LP9 entry

There are 4 chains in PDB entry 7LP9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 113	CYS 766
B	ASP 113	CYS 766
C	ASP 113	CYS 766
D	ASP 113	CYS 766

There are116 helices in PDB entry 7LP9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	113	123	Right-handed alpha
Helix 2	AA2	A	128	140	Right-handed alpha
Helix 3	AA3	A	145	149	Right-handed 310
Helix 4	AA4	A	156	164	Right-handed alpha
Helix 5	AA5	A	171	183	Right-handed alpha
Helix 6	AA6	A	185	191	Right-handed alpha
Helix 7	AA7	A	203	211	Right-handed alpha
Helix 8	AA8	A	213	223	Right-handed alpha
Helix 9	AA9	A	250	258	Right-handed alpha
Helix 10	AB1	A	260	269	Right-handed alpha
Helix 11	AB2	A	286	295	Right-handed alpha
Helix 12	AB3	A	298	320	Right-handed alpha
Helix 13	AB4	A	324	328	Right-handed 310
Helix 14	AB5	A	335	344	Right-handed alpha
Helix 15	AB6	A	345	354	Right-handed alpha
Helix 16	AB7	A	394	401	Right-handed alpha
Helix 17	AB8	A	411	414	Right-handed 310
Helix 18	AB9	A	415	429	Right-handed alpha
Helix 19	AC1	A	429	454	Right-handed alpha
Helix 20	AC2	A	468	500	Right-handed alpha
Helix 21	AC3	A	502	509	Right-handed alpha
Helix 22	AC4	A	510	532	Right-handed alpha
Helix 23	AC5	A	536	552	Right-handed alpha
Helix 24	AC6	A	553	558	Right-handed 310
Helix 25	AC7	A	559	599	Right-handed alpha
Helix 26	AC8	A	629	642	Right-handed alpha
Helix 27	AC9	A	655	671	Right-handed alpha
Helix 28	AD1	A	673	689	Right-handed alpha
Helix 29	AD2	A	689	712	Right-handed alpha
Helix 30	AD3	B	114	123	Right-handed alpha
Helix 31	AD4	B	128	140	Right-handed alpha
Helix 32	AD5	B	145	149	Right-handed 310
Helix 33	AD6	B	156	164	Right-handed alpha
Helix 34	AD7	B	171	183	Right-handed alpha
Helix 35	AD8	B	185	191	Right-handed alpha
Helix 36	AD9	B	203	211	Right-handed alpha
Helix 37	AE1	B	213	223	Right-handed alpha
Helix 38	AE2	B	250	258	Right-handed alpha
Helix 39	AE3	B	260	269	Right-handed alpha
Helix 40	AE4	B	286	295	Right-handed alpha
Helix 41	AE5	B	298	320	Right-handed alpha
Helix 42	AE6	B	324	328	Right-handed 310
Helix 43	AE7	B	335	344	Right-handed alpha
Helix 44	AE8	B	345	354	Right-handed alpha
Helix 45	AE9	B	394	401	Right-handed alpha
Helix 46	AF1	B	411	414	Right-handed 310
Helix 47	AF2	B	415	429	Right-handed alpha
Helix 48	AF3	B	429	454	Right-handed alpha
Helix 49	AF4	B	468	500	Right-handed alpha
Helix 50	AF5	B	502	509	Right-handed alpha
Helix 51	AF6	B	510	532	Right-handed alpha
Helix 52	AF7	B	536	552	Right-handed alpha
Helix 53	AF8	B	553	558	Right-handed 310
Helix 54	AF9	B	559	599	Right-handed alpha
Helix 55	AG1	B	629	642	Right-handed alpha
Helix 56	AG2	B	655	671	Right-handed alpha
Helix 57	AG3	B	673	689	Right-handed alpha
Helix 58	AG4	B	689	712	Right-handed alpha
Helix 59	AG5	C	114	123	Right-handed alpha
Helix 60	AG6	C	128	140	Right-handed alpha
Helix 61	AG7	C	145	149	Right-handed 310
Helix 62	AG8	C	156	164	Right-handed alpha
Helix 63	AG9	C	171	183	Right-handed alpha
Helix 64	AH1	C	185	191	Right-handed alpha
Helix 65	AH2	C	203	211	Right-handed alpha
Helix 66	AH3	C	213	223	Right-handed alpha
Helix 67	AH4	C	250	258	Right-handed alpha
Helix 68	AH5	C	260	269	Right-handed alpha
Helix 69	AH6	C	286	295	Right-handed alpha
Helix 70	AH7	C	298	320	Right-handed alpha
Helix 71	AH8	C	324	328	Right-handed 310
Helix 72	AH9	C	335	344	Right-handed alpha
Helix 73	AI1	C	345	354	Right-handed alpha
Helix 74	AI2	C	394	401	Right-handed alpha
Helix 75	AI3	C	411	414	Right-handed 310
Helix 76	AI4	C	415	429	Right-handed alpha
Helix 77	AI5	C	429	454	Right-handed alpha
Helix 78	AI6	C	468	500	Right-handed alpha
Helix 79	AI7	C	502	509	Right-handed alpha
Helix 80	AI8	C	510	532	Right-handed alpha
Helix 81	AI9	C	536	552	Right-handed alpha
Helix 82	AJ1	C	553	558	Right-handed 310
Helix 83	AJ2	C	559	599	Right-handed alpha
Helix 84	AJ3	C	629	642	Right-handed alpha
Helix 85	AJ4	C	655	671	Right-handed alpha
Helix 86	AJ5	C	673	689	Right-handed alpha
Helix 87	AJ6	C	689	712	Right-handed alpha
Helix 88	AJ7	D	114	123	Right-handed alpha
Helix 89	AJ8	D	128	140	Right-handed alpha
Helix 90	AJ9	D	145	149	Right-handed 310
Helix 91	AK1	D	156	164	Right-handed alpha
Helix 92	AK2	D	171	183	Right-handed alpha
Helix 93	AK3	D	185	191	Right-handed alpha
Helix 94	AK4	D	203	211	Right-handed alpha
Helix 95	AK5	D	213	223	Right-handed alpha
Helix 96	AK6	D	250	258	Right-handed alpha
Helix 97	AK7	D	260	270	Right-handed alpha
Helix 98	AK8	D	286	295	Right-handed alpha
Helix 99	AK9	D	298	320	Right-handed alpha
Helix 100	AL1	D	324	328	Right-handed 310
Helix 101	AL2	D	335	344	Right-handed alpha
Helix 102	AL3	D	345	354	Right-handed alpha
Helix 103	AL4	D	394	401	Right-handed alpha
Helix 104	AL5	D	411	414	Right-handed 310
Helix 105	AL6	D	415	429	Right-handed alpha
Helix 106	AL7	D	429	454	Right-handed alpha
Helix 107	AL8	D	468	500	Right-handed alpha
Helix 108	AL9	D	502	509	Right-handed alpha
Helix 109	AM1	D	510	532	Right-handed alpha
Helix 110	AM2	D	536	552	Right-handed alpha
Helix 111	AM3	D	553	558	Right-handed 310
Helix 112	AM4	D	559	599	Right-handed alpha
Helix 113	AM5	D	629	642	Right-handed alpha
Helix 114	AM6	D	655	671	Right-handed alpha
Helix 115	AM7	D	673	689	Right-handed alpha
Helix 116	AM8	D	689	712	Right-handed alpha

There are 4 sheets in PDB entry 7LP9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	368	373	first strand
Strand 2	A	377	382	anti-parallel
Strand 3	A	736	747	anti-parallel
Strand 4	A	724	730	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	368	373	first strand
Strand 2	B	377	382	anti-parallel
Strand 3	B	736	747	anti-parallel
Strand 4	B	724	730	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	368	373	first strand
Strand 2	C	377	382	anti-parallel
Strand 3	C	736	747	anti-parallel
Strand 4	C	724	730	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	368	373	first strand
Strand 2	D	377	382	anti-parallel
Strand 3	D	736	747	anti-parallel
Strand 4	D	724	730	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7LP9

Analysis of interatomic Contacts of Structural Units in PDB entry:
7LP9