Analysis of interatomic Contacts of Structural Units in PDB entry:
7LPC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7LPC entry

There are 4 chains in PDB entry 7LPC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 ILE 277TRP 752
A
 ILE 277TRP 752
B
 ILE 277TRP 752
D
 ILE 277TRP 752
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 76 helices in PDB entry 7LPC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
286 295Right-handed alpha
Helix 2
AA2
C
298 320Right-handed alpha
Helix 3
AA3
C
335 344Right-handed alpha
Helix 4
AA4
C
345 354Right-handed alpha
Helix 5
AA5
C
394 401Right-handed alpha
Helix 6
AA6
C
411 414Right-handed 310
Helix 7
AA7
C
415 429Right-handed alpha
Helix 8
AA8
C
429 454Right-handed alpha
Helix 9
AA9
C
468 500Right-handed alpha
Helix 10
AB1
C
502 509Right-handed alpha
Helix 11
AB2
C
510 532Right-handed alpha
Helix 12
AB3
C
536 552Right-handed alpha
Helix 13
AB4
C
553 558Right-handed 310
Helix 14
AB5
C
559 599Right-handed alpha
Helix 15
AB6
C
629 640Right-handed alpha
Helix 16
AB7
C
641 643Right-handed 310
Helix 17
AB8
C
655 671Right-handed alpha
Helix 18
AB9
C
673 689Right-handed alpha
Helix 19
AC1
C
689 712Right-handed alpha
Helix 20
AC2
A
286 295Right-handed alpha
Helix 21
AC3
A
298 320Right-handed alpha
Helix 22
AC4
A
335 344Right-handed alpha
Helix 23
AC5
A
345 354Right-handed alpha
Helix 24
AC6
A
394 401Right-handed alpha
Helix 25
AC7
A
411 414Right-handed 310
Helix 26
AC8
A
415 429Right-handed alpha
Helix 27
AC9
A
429 454Right-handed alpha
Helix 28
AD1
A
468 500Right-handed alpha
Helix 29
AD2
A
502 509Right-handed alpha
Helix 30
AD3
A
510 532Right-handed alpha
Helix 31
AD4
A
536 552Right-handed alpha
Helix 32
AD5
A
553 558Right-handed 310
Helix 33
AD6
A
559 599Right-handed alpha
Helix 34
AD7
A
629 640Right-handed alpha
Helix 35
AD8
A
641 643Right-handed 310
Helix 36
AD9
A
655 671Right-handed alpha
Helix 37
AE1
A
673 689Right-handed alpha
Helix 38
AE2
A
689 712Right-handed alpha
Helix 39
AE3
B
286 295Right-handed alpha
Helix 40
AE4
B
298 320Right-handed alpha
Helix 41
AE5
B
335 344Right-handed alpha
Helix 42
AE6
B
345 354Right-handed alpha
Helix 43
AE7
B
394 401Right-handed alpha
Helix 44
AE8
B
411 414Right-handed 310
Helix 45
AE9
B
415 429Right-handed alpha
Helix 46
AF1
B
429 454Right-handed alpha
Helix 47
AF2
B
468 500Right-handed alpha
Helix 48
AF3
B
502 509Right-handed alpha
Helix 49
AF4
B
510 532Right-handed alpha
Helix 50
AF5
B
536 552Right-handed alpha
Helix 51
AF6
B
553 558Right-handed 310
Helix 52
AF7
B
559 599Right-handed alpha
Helix 53
AF8
B
629 640Right-handed alpha
Helix 54
AF9
B
641 643Right-handed 310
Helix 55
AG1
B
655 671Right-handed alpha
Helix 56
AG2
B
673 689Right-handed alpha
Helix 57
AG3
B
689 712Right-handed alpha
Helix 58
AG4
D
286 295Right-handed alpha
Helix 59
AG5
D
298 320Right-handed alpha
Helix 60
AG6
D
335 344Right-handed alpha
Helix 61
AG7
D
345 354Right-handed alpha
Helix 62
AG8
D
394 401Right-handed alpha
Helix 63
AG9
D
411 414Right-handed 310
Helix 64
AH1
D
415 429Right-handed alpha
Helix 65
AH2
D
429 454Right-handed alpha
Helix 66
AH3
D
468 500Right-handed alpha
Helix 67
AH4
D
502 509Right-handed alpha
Helix 68
AH5
D
510 532Right-handed alpha
Helix 69
AH6
D
536 552Right-handed alpha
Helix 70
AH7
D
553 558Right-handed 310
Helix 71
AH8
D
559 599Right-handed alpha
Helix 72
AH9
D
629 640Right-handed alpha
Helix 73
AI1
D
641 643Right-handed 310
Helix 74
AI2
D
655 671Right-handed alpha
Helix 75
AI3
D
673 689Right-handed alpha
Helix 76
AI4
D
689 712Right-handed alpha
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There are 4 sheets in PDB entry 7LPC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
368 373first strand
Strand 2
C
377 382anti-parallel
Strand 3
C
736 747anti-parallel
Strand 4
C
724 730anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
368 373first strand
Strand 2
A
377 382anti-parallel
Strand 3
A
736 747anti-parallel
Strand 4
A
724 730anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
368 373first strand
Strand 2
B
377 382anti-parallel
Strand 3
B
736 747anti-parallel
Strand 4
B
724 730anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
368 373first strand
Strand 2
D
377 382anti-parallel
Strand 3
D
736 747anti-parallel
Strand 4
D
724 730anti-parallel
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